DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8924 and fru

DIOPT Version :10

Sequence 1:NP_573091.1 Gene:CG8924 / 32557 FlyBaseID:FBgn0030710 Length:514 Species:Drosophila melanogaster
Sequence 2:NP_001163648.1 Gene:fru / 42226 FlyBaseID:FBgn0004652 Length:960 Species:Drosophila melanogaster


Alignment Length:795 Identity:157/795 - (19%)
Similarity:257/795 - (32%) Gaps:334/795 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 QEFCVRWNSHLGSIGAAFPQLLAGQRFVDVTLACEGQQVHCHRLVLAACSTYFEAILAEHPCKHP 70
            |:||:|||:|..::......||..:...||||||||:.|..|:.:|:|||.|||.|..::...||
  Fly   109 QQFCLRWNNHPTNLTGVLTSLLQREALCDVTLACEGETVKAHQTILSACSPYFETIFLQNQHPHP 173

  Fly    71 VIILPREIKLWEIQALVDFMYKGEVNVTQAGLGQLLRCAEQLQIRGL-------YGSE------- 121
            :|.| ::::..|:::|:||||||||||.|:.|...|:.||.||:|||       |.|:       
  Fly   174 IIYL-KDVRYSEMRSLLDFMYKGEVNVGQSSLPMFLKTAESLQVRGLTDNNNLNYRSDCDKLRDS 237

  Fly   122 --------APINY--------------------------------------KKLQQASLEAAKDP 140
                    .|.||                                      ..:.:.|..||...
  Fly   238 AASSPTGRGPSNYTGGLGGAGGVADAMRESRDSLRSRCERDLRDELTQRSSSSMSERSSAAAAAA 302

  Fly   141 AATTA--------------------------------------------------RS-------- 147
            ||..|                                                  ||        
  Fly   303 AAAAAVAAAGGNVNAAAVALGLTTPTGGERSPSVGSASAAAAAAAVAAAVAAAANRSASADGCSD 367

  Fly   148 ---------------------FKHVDSAETDDAAT---NSTTSTTMTTSSAPPLPVNHQQPTVLK 188
                                 :.:.|:..::.::|   |:..:.....||:.    |:...:..:
  Fly   368 RGSERGTLERTDSRDDLLQLDYSNKDNNNSNSSSTGGNNNNNNNNNNNSSSN----NNNSSSNRE 428

  Fly   189 RQNPDARQQQQQQQQQQVQQR-----PQINGSNAQQPSKATSTN----VLGSHSNAPTEDDS--- 241
            |.|...|::::::::::.:.|     |....|::::..|.:|:|    :..||.:.....||   
  Fly   429 RNNSGERERERERERERDRDRELSTTPVEQLSSSKRRRKNSSSNCDNSLSSSHQDRHYPQDSQAN 493

  Fly   242 --GDEVPNNWNAYGEQFD--------------------DCNISAQAVDNKMNVHLSLQQARMQMQ 284
              ...||....:..|..|                    ..|:.|.:..:.::..||::|..|..|
  Fly   494 FKSSPVPKTGGSTSESEDAGGRHDSPLSMTTSVHLGGGGGNVGAASALSGLSQSLSIKQELMDAQ 558

  Fly   285 LQQQ----------QYLDS-----NVEDDHNYVAAH--------DENNDSSFATGVPCGSGLSLS 326
            .|||          .||.|     :.||....:..|        ||:||:.           .|.
  Fly   559 QQQQHREHHVALPPDYLPSAALKLHAEDMSTLLTQHALQAADARDEHNDAK-----------QLQ 612

  Fly   327 LD-TD--------------------LDTSAN---------------------------------- 336
            || ||                    ||.:..                                  
  Fly   613 LDQTDNIDGRVKCFNIKHDRHPDRELDRNHREHDDDPGVIEEVVVDHVREMEAGNEHDPEEMKEA 677

  Fly   337 ------------------------TSGGLSHSSIDGYTSYKRVRRSEASLAQAAKCVSKGETFQT 377
                                    .||..|...:||  .|....:.:....:|.:|..:......
  Fly   678 AYHATPPKYRRAVVYAPPHPDEEAASGSGSDIYVDG--GYNCEYKCKELNMRAIRCSRQQHMMSH 740

  Fly   378 VS---------------NMFNIPVSTIRFYMARKGILPKRKRGRGASHAGNIIITTNSGKLSTVP 427
            .|               ..::.||:..:.|:|..|.:.:........||.:        :|...|
  Fly   741 YSPHHPHHRSLIDCPAEAAYSPPVANNQAYLASNGAVQQLDLSTYHGHANH--------QLHQHP 797

  Fly   428 ASITHPPAHPHIHTNPLPHTQSQQ---MSMDSLHLK-AGIANTSGSNSPATATATSMSPSFDMAT 488
            .|.|||.     |:...||..|..   ....|:.:. ||.|:.|.:::||:...:::||....::
  Fly   798 PSATHPS-----HSQSSPHYPSASGAGAGAGSVSVSIAGSASGSATSAPASVATSAVSPQPSSSS 857

  Fly   489 TGDIVPFHLHSDAAA 503
            ||..      |.|||
  Fly   858 TGST------SSAAA 866

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8924NP_573091.1 BTB_POZ_BAB-like 32..116 CDD:349624 41/83 (49%)
MerR 378..407 CDD:425647 6/43 (14%)
fruNP_001163648.1 BTB_POZ_BAB-like 135..218 CDD:349624 41/83 (49%)
C2H2 Zn finger 901..918 CDD:275368
C2H2 Zn finger 925..944 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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