DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8924 and Trl

DIOPT Version :9

Sequence 1:NP_573091.1 Gene:CG8924 / 32557 FlyBaseID:FBgn0030710 Length:514 Species:Drosophila melanogaster
Sequence 2:NP_001261846.1 Gene:Trl / 2768981 FlyBaseID:FBgn0013263 Length:623 Species:Drosophila melanogaster


Alignment Length:512 Identity:114/512 - (22%)
Similarity:182/512 - (35%) Gaps:151/512 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FCVRWNSHLGSIGAAFPQLLAGQRFVDVTLACEGQQVHCHRLVLAACSTYFEAILAEHPCKHPVI 72
            :.:.|..:..|:.:|...|......||.|||..|:....|::||.|.|.:...:|...||||||:
  Fly     9 YSLTWGDYGTSLVSAIQLLRCHGDLVDCTLAAGGRSFPAHKIVLCAASPFLLDLLKNTPCKHPVV 73

  Fly    73 ILPREIKLWEIQALVDFMYKGEVNVTQAGLGQLLRCAEQLQIRGLYGSEAPINYKKLQQASLEAA 137
            :| ..:...:::||::|:|:|||:|..|.|..||:.|:.|.|:||    ||....|         
  Fly    74 ML-AGVNANDLEALLEFVYRGEVSVDHAQLPSLLQAAQCLNIQGL----APQTVTK--------- 124

  Fly   138 KDPAATTARSFKHVDSAETDDAATNSTTSTTMTTSSAPPLPVNHQQPTVLKRQNPDARQQQQQQQ 202
                               ||..|:|.....|       :|.:|.|..::.......:|....|.
  Fly   125 -------------------DDYTTHSIQLQHM-------IPQHHDQDQLIATIATAPQQTVHAQV 163

  Fly   203 QQQVQQRPQINGSNAQQPSKATSTNVLGSHSNAPTEDDSGDEVPNNWNAYGEQFDDCNISAQAVD 267
            .:.:..:.||       ....|.||..|......|.|.:..:                   ||| 
  Fly   164 VEDIHHQGQI-------LQATTQTNAAGQQQTIVTTDAAKHD-------------------QAV- 201

  Fly   268 NKMNVHLSLQQARMQMQLQQQQYLDSNVEDDHNYVAAHDENNDSSFATGVPCGSGLSL--SLDTD 330
                :...|...:.:.::::..                            |....:|.  .:||.
  Fly   202 ----IQAFLPARKRKPRVKKMS----------------------------PTAPKISKVEGMDTI 234

  Fly   331 LDTSANTSGGLSHSSIDGYTSYKRVRRSEASLAQAAKCV-SKGETFQTV-----SNMFNIPVSTI 389
            :.|..::.|..|...:.|...      :|..|..:...: |:|:..:|:     :||  |||::.
  Fly   235 MGTPTSSHGSGSVQQVLGENG------AEGQLLSSTPIIKSEGQKVETIVTMDPNNM--IPVTSA 291

  Fly   390 RFYMARKGILPKRKRGRGASHAGNIIITTNSGKLSTVPAS-ITHPPAHPHIHTNPLPHTQSQQMS 453
            .  .|...|.|  .:|...|..||     .||.|||..|. ..|||.    ...|...:||:|.:
  Fly   292 N--AATGEITP--AQGATGSSGGN-----TSGVLSTPKAKRAKHPPG----TEKPRSRSQSEQPA 343

  Fly   454 MDSL-------------HL------KAGIANTSGSNSPATATATSMSPSFDMATTGD 491
            ...:             ||      |.|:.....|.|   ...|::..|.:|.||.:
  Fly   344 TCPICYAVIRQSRNLRRHLELRHFAKPGVKKEKKSKS---GNDTTLDSSMEMNTTAE 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8924NP_573091.1 BTB 25..117 CDD:279045 35/91 (38%)
BTB 34..117 CDD:197585 33/82 (40%)
MerR 378..407 CDD:278788 9/33 (27%)
TrlNP_001261846.1 BTB 27..117 CDD:279045 35/90 (39%)
BTB 35..118 CDD:197585 35/87 (40%)
GAGA 319..372 CDD:150045 11/56 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 59 1.000 Domainoid score I10615
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 1 1.000 - - otm40394
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
55.010

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