DRSC/TRiP Functional Genomics Resources

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Protein Alignment Stim and stim-1

DIOPT Version :10

Sequence 1:NP_523357.2 Gene:Stim / 32556 FlyBaseID:FBgn0045073 Length:570 Species:Drosophila melanogaster
Sequence 2:NP_741074.1 Gene:stim-1 / 175201 WormBaseID:WBGene00021910 Length:530 Species:Caenorhabditis elegans


Alignment Length:422 Identity:132/422 - (31%)
Similarity:209/422 - (49%) Gaps:42/422 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 VQDRFGMEAIASLHRQLDDDDNGNIDLSESDDFLREELKY-DSGYEKRQKAFHFNDDMHISVKEL 201
            ::|:.|.|||..:||.:|||.:|:||.:||..|::|:::. .|...:|:..||.:||. |:|.:|
 Worm    38 IRDKLGYEAIRDIHRDMDDDHSGSIDRNESTGFMKEDMQMRGSERTRRENKFHGDDDA-ITVDDL 101

  Fly   202 WEAWLRSEVHNWTIEQTTDWLAQSVQLPQYVDLFKLHKVTGAALPRLAVNNLQYVGNVLGIKDPI 266
            ||||..|....||.|:..:||...|.||..|:..|..|:.|..|||.|..|..::...||||..:
 Worm   102 WEAWFESIERTWTNERLVEWLINDVNLPSIVEAVKAKKIDGKILPRFASPNSDFLNKELGIKSSV 166

  Fly   267 HKQKISLKAMDVVLFGPPRETGTRWKDYIL--VTLLLSAIIGCWYAYQQNKNAKRHLRRMAQDME 329
            ::||:.|.::|||||| .::...|.||.:|  :.|||:::|   :.|.:.|              
 Worm   167 YRQKLRLNSLDVVLFG-YKDNNNRTKDILLAFLALLLTSLI---FLYVRQK-------------- 213

  Fly   330 GLQRAEQSLQEMQKELERAR-MEQENVATEKLDLERRLKEAPTLSSSNSDLEVQQLKKEIEMLRN 393
              |:|:|.:.|:..:|...: ||.|....:|:..:.|.|.      |.||..|..  .|:|.||.
 Worm   214 --QKAQQKVNELSNKLTELKCMETEFEDVQKMLNDERSKR------SISDGVVNH--TEMENLRV 268

  Fly   394 ELSRAE--FELVDNCWSPPPQLQSWLQYTYELESKNHQKKRTSAEKQLQSAREACEKLRKKRSSL 456
            :|..||  .|...|....|..||..|:.|.|.|....:|:|....|:::.|.|..::|:||:.|:
 Worm   269 QLEEAERRLEANSNGSQAPLALQPLLRRTCENEMAFLEKQRQDCFKEMKEAIEMVDRLQKKQGSV 333

  Fly   457 VGAFVSTHG--KSIDDVDRSIVEARNALGDVTNELQERLHRWKQIETCLGLNIVNNNGLPYLENV 519
            :.:.....|  .:.|.||..|...::.:..:....:|...||.|||:..|..::..|...::...
 Worm   334 LSSLKLATGAASTSDQVDSKIFALKSRMEKIHTLTRETQERWLQIESLCGFPLLYLNETEHINRS 398

  Fly   520 L-----YGRNGGLQSSMGMSSTKGSRARITNS 546
            :     |.::....||.|..|...|.....||
 Worm   399 IASSHFYNKSHEGSSSSGSISNAHSNPNAVNS 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
StimNP_523357.2 SAM_STIM-1,2-like 209..282 CDD:188903 28/72 (39%)
YhaN 312..>501 CDD:443752 51/193 (26%)
SOAR 408..507 CDD:465164 28/100 (28%)
stim-1NP_741074.1 SAM_superfamily 109..182 CDD:472832 28/72 (39%)
SOAR 285..386 CDD:465164 28/100 (28%)

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