DRSC/TRiP Functional Genomics Resources

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Protein Alignment Stim and LOC101730384

DIOPT Version :9

Sequence 1:NP_523357.2 Gene:Stim / 32556 FlyBaseID:FBgn0045073 Length:570 Species:Drosophila melanogaster
Sequence 2:XP_031760469.1 Gene:LOC101730384 / 101730384 -ID:- Length:568 Species:Xenopus tropicalis


Alignment Length:318 Identity:141/318 - (44%)
Similarity:200/318 - (62%) Gaps:17/318 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   208 SEVHNWTIEQTTDWLAQSVQLPQYVDLFKLHKVTGAALPRLAVNNLQYVGNVLGIKDPIHKQKIS 272
            |||||||.|:|..||.:.|:||||...|:.:.|.|.||||:|||....:.:.|.|.|..|:||..
 Frog     4 SEVHNWTEEETLQWLLEFVELPQYEKNFRENSVKGTALPRIAVNEPVLMISQLKITDRSHRQKFQ 68

  Fly   273 LKAMDVVLFGPPRETGTRW-KDYILVTLLLSAIIGCWYAYQQNKNAKRHLRRMAQDMEGLQRAEQ 336
            |||:||||||||......| ||:||...::..:.|||:||.||:.:|.|:.:|.:|:||||:||.
 Frog    69 LKALDVVLFGPPTRPPHNWVKDFILTISIVIGVGGCWFAYSQNRTSKEHISQMMKDLEGLQKAEI 133

  Fly   337 SLQEMQKELERARMEQENVATEKLDLERRL--------KEAPTLSS--SNSDLEVQQLK---KEI 388
            ||.|:|..||:|:.|...||.||.:|||::        :||..|..  ..::.|:.:||   :|:
 Frog   134 SLLELQDRLEKAQEENRTVAVEKQNLERKMMDEISDAKREAHRLRELREGTECELSRLKYAEEEL 198

  Fly   389 EMLRNELSRA--EFELVDNCWSPPPQLQSWLQYTYELESKNHQKKRTSAEKQLQSAREACEKLRK 451
            ..:|..|.:|  ||||..| ||.|..||.|||.|:|:|.:.:..|:.:||..|..|::..||::|
 Frog   199 VQVRMALKKAEKEFELRSN-WSVPETLQKWLQLTHEVEVQYYNIKKQNAEMHLAIAKDEAEKIKK 262

  Fly   452 KRSSLVGAFVSTHGKSIDDVDRSIVEARNALGDVTNELQERLHRWKQIETCLGLNIVN 509
            |||::.|.....|..|:|:||..|:||:.||.::|..|:|||:||:|||...|..||:
 Frog   263 KRSTVFGTLHVAHSSSLDEVDHKILEAKKALSELTTCLRERLYRWQQIEKMCGFPIVH 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
StimNP_523357.2 SAM_STIM-1,2-like 209..282 CDD:188903 38/72 (53%)
SAM 210..271 CDD:197735 29/60 (48%)
GBP_C <312..392 CDD:303769 34/92 (37%)
coiled coil 360..372 CDD:293879 5/19 (26%)
coiled coil 381..392 CDD:293879 3/13 (23%)
SOAR 410..507 CDD:293141 42/96 (44%)
LOC101730384XP_031760469.1 SAM_STIM2 5..78 CDD:188973 38/72 (53%)
PRK00409 <128..242 CDD:234750 45/114 (39%)
SOAR 221..318 CDD:406837 42/96 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 109 1.000 Domainoid score I6270
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001884
OrthoInspector 1 1.000 - - otm49137
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1416
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.910

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