DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Stim and LOC101730384

DIOPT Version :10

Sequence 1:NP_523357.2 Gene:Stim / 32556 FlyBaseID:FBgn0045073 Length:570 Species:Drosophila melanogaster
Sequence 2:XP_031760469.1 Gene:LOC101730384 / 101730384 XenbaseID:XB-GENE-29084511 Length:568 Species:Xenopus tropicalis


Alignment Length:318 Identity:141/318 - (44%)
Similarity:200/318 - (62%) Gaps:17/318 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   208 SEVHNWTIEQTTDWLAQSVQLPQYVDLFKLHKVTGAALPRLAVNNLQYVGNVLGIKDPIHKQKIS 272
            |||||||.|:|..||.:.|:||||...|:.:.|.|.||||:|||....:.:.|.|.|..|:||..
 Frog     4 SEVHNWTEEETLQWLLEFVELPQYEKNFRENSVKGTALPRIAVNEPVLMISQLKITDRSHRQKFQ 68

  Fly   273 LKAMDVVLFGPPRETGTRW-KDYILVTLLLSAIIGCWYAYQQNKNAKRHLRRMAQDMEGLQRAEQ 336
            |||:||||||||......| ||:||...::..:.|||:||.||:.:|.|:.:|.:|:||||:||.
 Frog    69 LKALDVVLFGPPTRPPHNWVKDFILTISIVIGVGGCWFAYSQNRTSKEHISQMMKDLEGLQKAEI 133

  Fly   337 SLQEMQKELERARMEQENVATEKLDLERRL--------KEAPTLSS--SNSDLEVQQLK---KEI 388
            ||.|:|..||:|:.|...||.||.:|||::        :||..|..  ..::.|:.:||   :|:
 Frog   134 SLLELQDRLEKAQEENRTVAVEKQNLERKMMDEISDAKREAHRLRELREGTECELSRLKYAEEEL 198

  Fly   389 EMLRNELSRA--EFELVDNCWSPPPQLQSWLQYTYELESKNHQKKRTSAEKQLQSAREACEKLRK 451
            ..:|..|.:|  ||||..| ||.|..||.|||.|:|:|.:.:..|:.:||..|..|::..||::|
 Frog   199 VQVRMALKKAEKEFELRSN-WSVPETLQKWLQLTHEVEVQYYNIKKQNAEMHLAIAKDEAEKIKK 262

  Fly   452 KRSSLVGAFVSTHGKSIDDVDRSIVEARNALGDVTNELQERLHRWKQIETCLGLNIVN 509
            |||::.|.....|..|:|:||..|:||:.||.::|..|:|||:||:|||...|..||:
 Frog   263 KRSTVFGTLHVAHSSSLDEVDHKILEAKKALSELTTCLRERLYRWQQIEKMCGFPIVH 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
StimNP_523357.2 SAM_STIM-1,2-like 209..282 CDD:188903 38/72 (53%)
YhaN 312..>501 CDD:443752 84/203 (41%)
SOAR 408..507 CDD:465164 43/98 (44%)
LOC101730384XP_031760469.1 SAM_STIM2 5..78 CDD:188973 38/72 (53%)
PRK00409 <128..242 CDD:234750 45/114 (39%)
SOAR 219..318 CDD:465164 43/98 (44%)

Return to query results.
Submit another query.