Protein Alignment Lcch3 and glra2

DIOPT Version :9

• Sequence 1: NP_996469.1
• Gene: Lcch3 / 32554
• FlyBaseID: FBgn0010240
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: NP_001161371.1
• Gene: glra2 / 793646
• ZFINID: ZDB-GENE-090407-1
• Length: 448
• Species: Danio rerio
• Alignment Length: 473
• Identity: 185/473 - (39%)
• Similarity: 255/473 - (53%)
• Gaps: 91/473 - (19%)

  Fly    31 DVLAGRLENVTQTISNILQGYDIRLRPNFGGEPLHVGMDLTIASFDAISEVNMDYTITMYLNQYW 95
            |.|.||           ..|||.|:||||.|.|::|..::.|.||.:::|..|||.:.::|.|.|
Zfish    46 DKLMGR-----------TSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQKW 99

  Fly    96 RDERLAFNIFGQYFDDENDDGISDVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLGG 160
            .|.|||::   :|.|..        |.|.....:.||.||.||||:|.:..||||..|||:|:..
Zfish   100 NDPRLAYS---EYPDSS--------LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRIFK 153

  Fly   161 DGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYW-KPTPVRGVEDAELPQF 224
            ||.|.|.:|.|..|:|.|||..:|:|.|.||:::||:|||::|::..| ...||:..:...||||
Zfish   154 DGTVLYSIRLTLILSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLDKGPVQVADGLTLPQF 218

  Fly   225 TI-----IGYETNDRKERLATGVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEA 284
            .|     :||.|    :...||.:..:.:.|.|:|.:||::.|.|:||:|||:|||||||||.:|
Zfish   219 LIRDEKDLGYCT----KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDA 279

  Fly   285 TSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYTYWGKRA 349
            ..|||||||||||||||.|:|.|:|||::||||||||::.:|.:||||||||||.||:.   .|.
Zfish   280 APARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAGVNFV---SRQ 341

  Fly   350 KKKIKKVKECCPGKIGKSERSETCSTTEDIIELQDVRMSPIPSLRRGTYNATL---DSIGTETMN 411
            :|:..::|          .|.......||   |||.|      |...:||.|.   |....:...
Zfish   342 QKEFLRLK----------RRQRRTQKEED---LQDGR------LHFSSYNTTTCVKDGAVVKNTQ 387

  Fly   412 LGKF-PPSFRITRNYGTGHSQLRRRAQRGISTRPRMLHALKRGASAIKATIPKIKDVNIIDKYSR 475
            :.:. .||  |.:|..|...:...||:|                               ||..||
Zfish   388 VNQIQQPS--ILKNTETNRKKFVDRAKR-------------------------------IDTISR 419

  Fly   476 MIFPISFLAFNLGYWLFY 493
            ..||::||.||:.||:.|
Zfish   420 AAFPLAFLIFNVFYWITY 437

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lcch3	NP_996469.1	LIC	15..493	CDD:273305	184/471 (39%)
		Neur_chan_LBD	47..256	CDD:280998	84/214 (39%)
		Neur_chan_memb	263..490	CDD:280999	91/230 (40%)
glra2	NP_001161371.1	LIC	44..437	CDD:273305	184/471 (39%)
		Neur_chan_LBD	45..251	CDD:280998	88/230 (38%)
		Neur_chan_memb	258..434	CDD:280999	91/230 (40%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.910