Protein Alignment Lcch3 and gabrr2a

DIOPT Version :9

• Sequence 1: NP_996469.1
• Gene: Lcch3 / 32554
• FlyBaseID: FBgn0010240
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: XP_017207163.1
• Gene: gabrr2a / 751659
• ZFINID: ZDB-GENE-060825-164
• Length: 475
• Species: Danio rerio
• Alignment Length: 484
• Identity: 190/484 - (39%)
• Similarity: 269/484 - (55%)
• Gaps: 81/484 - (16%)

  Fly    31 DVLAGRLENVTQTISNILQGYDIRLRPNFGGEPLHVGMDLTIASFDAISEVNMDYTITMYLNQYW 95
            ||...|.....|.:.  :..:|..:||.|||..:.||:|:.:.|.|:||||:||:|:|:||..||
Zfish    51 DVTKSRRLKTEQLLK--VDDHDFTMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYW 113

  Fly    96 RDERLAFNIFGQYFDDENDDGISDVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLGG 160
            :||||:|.           ...:..:|..|...:||||||.||.:.|.||:||.|..|.::|:..
Zfish   114 KDERLSFT-----------SSTNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTENIMLRVFP 167

  Fly   161 DGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWKPTPVRGVED------A 219
            ||.|.|.:|.|.|.||.||...:|||||.|::|:|||.||..|:::|||    .|.|.      .
Zfish   168 DGHVLYSLRVTVTAACNMDFSRFPLDSQTCSLELESYAYTDEDLMLYWK----NGDESLSIDEKI 228

  Fly   220 ELPQFTIIGYETNDRKERLA----TGVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWI 280
            .|.||.|..:.|.   .|||    ||.|.||.::|.|:|:|.:|:.|||.|:.|:||||||||||
Zfish   229 SLSQFLIQKFHTT---SRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWI 290

  Fly   281 NHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-TY 344
            :..|..|||:|||||||||:||.|||.:|:||:||:||:||||.:.|||||.::|||||||| |.
Zfish   291 DRRAVPARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTT 355

  Fly   345 WGKRAKKKI--KKVKE----CCPGKIGKSERSETCSTTEDIIELQDVRMSPIPSLRRGTYNATLD 403
            ..:|.::|:  :.|:|    |            ||..:.....:.|           |||:.
Zfish   356 VQERRERKLRDRAVREQSLPC------------TCGMSHTRTMMLD-----------GTYSE--- 394

  Fly   404 SIGTETMNLGKFPPSFRITRNYGTGHSQLRRRAQR----GISTRPRMLHALKRGASAIKATIPKI 464
               .:|.:|..:..:..:       |.::....|.    .:|......:..|:|..|::.    :
Zfish   395 ---ADTNSLAGYTEAPMV-------HEEVVPEKQEHMVVHLSVSSESTNTKKKGIRALRI----M 445

  Fly   465 KDVNIIDKYSRMIFPISFLAFNLGYWLFY 493
            ::.:.||||||||||.:::.|||.||..|
Zfish   446 QNTHAIDKYSRMIFPGAYIIFNLIYWSVY 474

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lcch3	NP_996469.1	LIC	15..493	CDD:273305	189/482 (39%)
		Neur_chan_LBD	47..256	CDD:280998	91/218 (42%)
		Neur_chan_memb	263..490	CDD:280999	89/237 (38%)
gabrr2a	XP_017207163.1	LIC	43..474	CDD:273305	189/482 (39%)
		Neur_chan_LBD	60..266	CDD:280998	92/225 (41%)
		Neur_chan_memb	273..471	CDD:280999	89/237 (38%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3644
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR18945
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.910