Protein Alignment Lcch3 and gabrr3a

DIOPT Version :10

• Sequence 1: NP_996469.1
• Gene: Lcch3 / 32554
• FlyBaseID: FBgn0010240
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: NP_001122232.1
• Gene: gabrr3a / 570876
• ZFINID: ZDB-GENE-080722-20
• Length: 472
• Species: Danio rerio
• Alignment Length: 460
• Identity: 184/460 - (40%)
• Similarity: 257/460 - (55%)
• Gaps: 75/460 - (16%)

  Fly    48 LQGYDIRLRPNFGGEPLHVGMDLTIASFDAISEVNMDYTITMYLNQYWRDERLAFNIFGQYFDDE 112
            ::.:|..:||.|||..:.||:|:.:.|.|.|||||||:|:|:||..||:|:|||       |...
Zfish    73 IEDHDFAMRPGFGGSAIPVGIDVQVESIDGISEVNMDFTMTLYLRHYWQDDRLA-------FPSS 130

  Fly   113 NDDGISDVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLGGDGAVTYGMRFTTTLACM 177
            |:..    .|......:||||||.||.:.|.||:||.|..|.::|:..||.:.|.:|.|.|..|.
Zfish   131 NNKS----RTFDARLVKKIWVPDVFFVHSKRSFIHDTTMENIMLRVFPDGNILYSVRITVTALCS 191

  Fly   178 MDLHYYPLDSQNCTVEIESYGYTVSDVVMYWKPTPVRG-----VEDAELPQFTIIGYETNDRKER 237
            ||...:|||:|||::|:|||.|..:|:::|||    .|     .::..|.||.|   |.......
Zfish   192 MDFSRFPLDTQNCSLELESYAYNENDLMLYWK----NGNDSLRTDEIALSQFFI---EEFHPSYG 249

  Fly   238 LA----TGVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 298
            ||    ||.|.||.::|.|:|:|.:|:.|||.|::|:||||||||||:..|..|||:||||||||
Zfish   250 LAFYSSTGWYNRLYINFILRRHIFFFMLQTYFPTMLMVMLSWVSFWIDRRAVPARVSLGITTVLT 314

  Fly   299 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYTYWGKRAKKKIKKVKECCPGK 363
            |:||.|||.:|:|::|||||:||||...|:|||.:::||||||| :......||::|      ||
Zfish   315 MSTIITGVSASMPQVSYVKAVDIYLWASFLFVFLSVIEYAAVNY-FTTVEEMKKLQK------GK 372

  Fly   364 IGKSERSETCSTTEDIIELQDVRMSPIPSLRRGTYNATLDSI-----GTETMNLGKFPPSFRITR 423
            :..| ...|.:...|.....|:..||.|.|  .|..:|..:|     .||       ||....||
Zfish   373 LPAS-YDATQAMAYDGCFHDDIDASPFPEL--PTTPSTTRTIPARASSTE-------PPPTEGTR 427

  Fly   424 NYGTGHSQLRRRAQRGISTRPRMLHALKRGASAIKATIPKIKDVNIIDKYSRMIFPISFLAFNLG 488
                    |.|:...|.:.|..|.::.                  :||.|||::||:::|.||:.
Zfish   428 --------LWRKRSVGKNIRFIMSNSY------------------MIDSYSRILFPLAYLLFNII 466

  Fly   489 YWLFY 493
            ||..|
Zfish   467 YWCIY 471

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lcch3	NP_996469.1	LIC	15..493	CDD:273305	183/458 (40%)
gabrr3a	NP_001122232.1	LIC	67..471	CDD:455710	183/458 (40%)
		LGIC_ECD	88..272	CDD:475126	81/201 (40%)