Sequence 1: | NP_996469.1 | Gene: | Lcch3 / 32554 | FlyBaseID: | FBgn0010240 | Length: | 496 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001020724.1 | Gene: | gabrr1 / 568984 | ZFINID: | ZDB-GENE-040724-212 | Length: | 466 | Species: | Danio rerio |
Alignment Length: | 468 | Identity: | 184/468 - (39%) |
---|---|---|---|
Similarity: | 259/468 - (55%) | Gaps: | 91/468 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 48 LQGYDIRLRPNFGGEPLHVGMDLTIASFDAISEVNMDYTITMYLNQYWRDERLAFNIFGQYFDDE 112
Fly 113 NDDGISDVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLGGDGAVTYGMRFTTTLACM 177
Fly 178 MDLHYYPLDSQNCTVEIESYGYTVSDVVMYWKPTPVRGVEDAE------LPQFTIIGYETNDRKE 236
Fly 237 RLA----TGVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 297
Fly 298 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYTYWGKRAKKKIKKVKECCPG 362
Fly 363 KIGKSERSE-------TCSTTEDIIELQDVRMSPIPSLRRGTYNATLDSIGTETMNLGKFPPSFR 420
Fly 421 ITRNYGTGHSQLRRRAQRGISTRPRMLHAL---KRGAS--AIKATIPKIKDVNIIDKYSRMIFPI 480
Fly 481 SFLAFNLGYWLFY 493 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lcch3 | NP_996469.1 | LIC | 15..493 | CDD:273305 | 183/466 (39%) |
Neur_chan_LBD | 47..256 | CDD:280998 | 90/217 (41%) | ||
Neur_chan_memb | 263..490 | CDD:280999 | 88/238 (37%) | ||
gabrr1 | NP_001020724.1 | LIC | 44..464 | CDD:273305 | 183/466 (39%) |
LGIC_ECD | 81..266 | CDD:355788 | 83/202 (41%) | ||
Cys-loop | 183..197 | CDD:349787 | 8/13 (62%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3644 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |