DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcch3 and LOC561083

DIOPT Version :10

Sequence 1:NP_996469.1 Gene:Lcch3 / 32554 FlyBaseID:FBgn0010240 Length:496 Species:Drosophila melanogaster
Sequence 2:XP_009295726.2 Gene:LOC561083 / 561083 -ID:- Length:471 Species:Danio rerio


Alignment Length:477 Identity:187/477 - (39%)
Similarity:268/477 - (56%) Gaps:73/477 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 RKDVLAGRLENVTQTISNILQGYDIRLRPNFGGEPLHVGMDLTIASFDAISEVNMDYTITMYLNQ 93
            |||.....|....|.:.  ::.:|..:||.|||..:.||:|:.:.|.|:|||||||:|:|:||..
Zfish    55 RKDSTKSLLIKTEQLLR--IEDHDFAMRPAFGGSAIPVGIDVQVESIDSISEVNMDFTMTLYLRH 117

  Fly    94 YWRDERLAF---NIFGQYFDDENDDGISDVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKL 155
            ||:||||||   |...:.||              |...:|||.||.||.:.|.||:||.|..|.:
Zfish   118 YWKDERLAFPSSNNLSRTFD--------------GRLVKKIWKPDVFFVHSKRSFIHDTTMENIM 168

  Fly   156 VRLGGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWKPTPVRG----- 215
            :|:..||.:.|.:|.|.|..|.||...:|||:|||::|:|||.|..:|:::|||    .|     
Zfish   169 LRVYPDGNILYSVRITVTSLCSMDFSRFPLDTQNCSLELESYAYNENDLMLYWK----NGNDSLR 229

  Fly   216 VEDAELPQFTIIGYETNDRKERLA----TGVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 276
            .::..|.||.|..:..:   ..||    ||.|.||.::|.|:|:|.:|:.|||.|::|:|:||||
Zfish   230 TDEIALSQFFIEEFHVS---HGLALYSSTGWYNRLYINFILRRHIFFFMLQTYFPTMLMVVLSWV 291

  Fly   277 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVN 341
            ||||:..|..|||:|||||||||:||.|||.:|:|::|||||:|:||...|:|||..::||||||
Zfish   292 SFWIDRRAVPARVSLGITTVLTMSTIITGVSTSMPQVSYVKAVDVYLWTSFLFVFLTVIEYAAVN 356

  Fly   342 YTYWGKRAKKKIKKVKECCPGKIGKSERSETCSTTEDIIELQDVRMSPIPSLRRGTYNATLDSIG 406
            |.    ..|:::||:|:.   ||.:.:.|:..: .:.....||:.:|..|.|.....:..:.|..
Zfish   357 YF----TTKEEMKKLKQL---KISEYDASQAMA-FDGCFHDQDIELSSFPRLSDLNADTCVSSRN 413

  Fly   407 TETMNLGKFPPSFRITRNYGTGHSQLRRRAQRGISTRPRMLHALKRGASAIKATIPKIKDVNIID 471
            :.|.:|   ||..      ||   :||||.    |.|..:.|.:.....              ||
Zfish   414 STTADL---PPVL------GT---RLRRRR----SIRQSVNHIINNSYK--------------ID 448

  Fly   472 KYSRMIFPISFLAFNLGYWLFY 493
            .|||:.||:::..|||.||..|
Zfish   449 SYSRICFPLAYFLFNLIYWSIY 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcch3NP_996469.1 LIC 15..493 CDD:273305 186/475 (39%)
LOC561083XP_009295726.2 None

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