Protein Alignment Lcch3 and gabrg1

DIOPT Version :9

• Sequence 1: NP_996469.1
• Gene: Lcch3 / 32554
• FlyBaseID: FBgn0010240
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: XP_009305483.1
• Gene: gabrg1 / 556202
• ZFINID: ZDB-GENE-141215-66
• Length: 454
• Species: Danio rerio
• Alignment Length: 470
• Identity: 158/470 - (33%)
• Similarity: 233/470 - (49%)
• Gaps: 85/470 - (18%)

  Fly    39 NVTQTISNILQGYDIRLRPNFGGEPLHVGMDLTIASFDAISEVNMDYTITMYLNQYWRDERLAFN 103
            :||..::.:|||||.:|||:.|..|..:...:.:.|...:..:||:|||.::..|.|.|.||.||
Zfish    54 DVTLILNKLLQGYDNKLRPDIGVRPTVIETAVYVNSIGPVDPINMEYTIDIFFAQTWYDSRLKFN 118

  Fly   104 IFGQYFDDENDDGISDVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLGGDGAVTYGM 168
                        ....:|.|:.:...|||:|||||.|.:.|..|.:|..|:|:||..:|.|.|.:
Zfish   119 ------------SSMKLLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRLWSNGRVMYTL 171

  Fly   169 RFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWKPTPVRGVEDAE-----LPQFTIIG 228
            |.|....|.:.||.:|:|..:|.:|..||||..:::...|:.   |.||.|:     |.||..:|
Zfish   172 RLTINAECYLKLHNFPMDEHSCPLEFSSYGYPKNEIQYRWQR---RSVEVADQRYWRLYQFAFVG 233

  Fly   229 YETNDRKERLATGVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGI 293
            ...:.......:|.|..:::.|.|.|.:|||..|||:|..:||:|||||||||.:|..||.:|||
Zfish   234 LRNSSDVANTQSGEYVVMTIFFDLSRRMGYFTIQTYIPCSMIVVLSWVSFWINKDAVPARTSLGI 298

  Fly   294 TTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYTYWGKRAKKKIKKVKE 358
            ||||||||:||..|.|||::|||.|:|:::.:||:|.||||:||..::| :...|..||.|....
Zfish   299 TTVLTMTTLSTISRKSLPKVSYVTAMDLFVSVCFIFTFAALMEYGTLHY-FTSNRQNKKTKSSHA 362

  Fly   359 CCPGKIGKSERSETCSTTEDIIELQDVRMSPIPSLRRGTYNATLDSIGT---------ETMNLGK 414
            ..|..:                           ::|.||....:::|..         |.:: ||
Zfish   363 QKPSMV---------------------------NIRPGTSLLQMNNIAPYHEDDDYAYECLD-GK 399

  Fly   415 FPPSFRITRNYGTGHSQLRRRAQRGISTRPRMLHALKRGASAIKATIPKIKDVNIIDKYSRMIFP 479
            ...||....:           ..|..:.|...:|.                .|:.||.|||:.||
Zfish   400 DCTSFFCCFD-----------DCRSGAWRENRMHV----------------HVSKIDSYSRIFFP 437

  Fly   480 ISFLAFNLGYWLFYI 494
            .:|..|||.||:.|:
Zfish   438 TAFGLFNLVYWIGYL 452

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lcch3	NP_996469.1	LIC	15..493	CDD:273305	157/467 (34%)
		Neur_chan_LBD	47..256	CDD:280998	71/213 (33%)
		Neur_chan_memb	263..490	CDD:280999	78/235 (33%)
gabrg1	XP_009305483.1	Neur_chan_LBD	56..261	CDD:280998	72/219 (33%)
		LIC	58..451	CDD:273305	155/463 (33%)
		Neur_chan_memb	268..448	CDD:280999	78/235 (33%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.910