Sequence 1: | NP_996469.1 | Gene: | Lcch3 / 32554 | FlyBaseID: | FBgn0010240 | Length: | 496 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001097669.2 | Gene: | nAChRalpha4 / 40521 | FlyBaseID: | FBgn0266347 | Length: | 539 | Species: | Drosophila melanogaster |
Alignment Length: | 479 | Identity: | 92/479 - (19%) |
---|---|---|---|
Similarity: | 185/479 - (38%) | Gaps: | 73/479 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 46 NILQGYDIRLRPNFG-GEPLHVGMDLTIASFDAISEVNMDYTITMYLNQYWRDERLAFNIFGQYF 109
Fly 110 DDENDDGISDVLTLSGDFAEKIWVPD-TFFANDKNSFLHDVTERNKLVRLGGDGAVTYGMRFTTT 173
Fly 174 LACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWKPTPVRGVEDAELPQFTIIGYETND----- 233
Fly 234 ----------RKERLAT---GVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEAT 285
Fly 286 SARVALGITTVLTMTTISTGVRSSLPRIS-YVKAIDIYLVMCFVFVFAAL-LEYAAVNYTYWGKR 348
Fly 349 AKKKIKKVK----ECCPGKIGKSERSETCSTTEDIIELQDVRMSPIPSLRRGTYNAT-LDSIGTE 408
Fly 409 TMN--LGKFPPSFRITRNYGTGHS--------QLRRRAQRGISTRPRMLHALKRGASAIKATI-- 461
Fly 462 -PKIKDVNIIDKYSRMIFPISFLA 484 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lcch3 | NP_996469.1 | LIC | 15..493 | CDD:273305 | 92/479 (19%) |
Neur_chan_LBD | 47..256 | CDD:280998 | 44/228 (19%) | ||
Neur_chan_memb | 263..490 | CDD:280999 | 48/242 (20%) | ||
nAChRalpha4 | NP_001097669.2 | LIC | 1..505 | CDD:273305 | 92/479 (19%) |
Neur_chan_LBD | 12..227 | CDD:280998 | 44/229 (19%) | ||
Neur_chan_memb | 234..505 | CDD:280999 | 48/242 (20%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45447329 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18945 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.030 |