Protein Alignment Lcch3 and alka

DIOPT Version :10

• Sequence 1: NP_996469.1
• Gene: Lcch3 / 32554
• FlyBaseID: FBgn0010240
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: NP_610619.2
• Gene: alka / 36145
• FlyBaseID: FBgn0033558
• Length: 449
• Species: Drosophila melanogaster
• Alignment Length: 511
• Identity: 138/511 - (27%)
• Similarity: 225/511 - (44%)
• Gaps: 89/511 - (17%)

  Fly     5 TRVGVSCGLFFFLLGAQLQLIRCIRKDVLAGRLENVTQTISNILQGYDIRLRPNF---------G 60
            |...:|.||.|.|:.                 |...|:...|......:.|.||:         .
  Fly     7 TNAFISFGLGFILMW-----------------LSEATEAHMNYTAKPRVVLPPNYVKEIRPPSKK 54

  Fly    61 GEPLHVGMDLTIASFDAISEVNMDYTITMYLNQYWRDERLAFNIFGQYFDDENDDGISDVLTLSG 125
            |.|:.|...:.:...::|:..:||:.:.|:::|.|.:.||      :..||..::| .|.:||..
  Fly    55 GSPVIVDFSIFVVDINSINVEDMDFRVDMFIHQRWLESRL------EIPDDIFEEG-DDYVTLLP 112

  Fly   126 DFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLGGDGAVTYGMRFTTTLACMMDLHYYPLDSQNC 190
            :..|..|.||.:|.|.|.:.:..:|.:...|.|..:..|.|..|....:||.|:...||:|.|.|
  Fly   113 EVFENFWQPDPYFLNSKIAEIATLTHKFTSVTLYKNKTVRYAARMHAIIACQMEFQLYPMDIQVC 177

  Fly   191 TVEIESYGYTVSDVVMYWKPTPVRGVEDAELPQFTI---IGYETNDRKERLATGVYQRLSLSFKL 252
            .:.|||:......|.:.|..:.|....:.:|.|:.:   :..|.:|.......|.:.||::.|:.
  Fly   178 PIYIESFSSNNQKVKLRWSDSGVTLNPELKLLQYNLGQPLELEESDGYMPEKVGNFSRLTVYFRF 242

  Fly   253 QRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVK 317
            :|.||:.:.||:.||.|:|||||.|||:..:|...||.|.:|.:||:.|:.||  :.:|.::|||
  Fly   243 ERQIGHHLIQTFAPSSLVVMLSWFSFWLGLDAIPGRVTLLVTCMLTLVTMFTG--ADIPPVAYVK 305

  Fly   318 AIDIYLVMCFVFVFAALLEYAA-----VNYTYWGKRAKKKIKKVKECCPGKIGKSERSETCSTTE 377
            |:|:::..|.:.|||||.|:..     |.|.|       ::.::.:..|.:|...|:.: |:|
  Fly   306 ALDLWMAGCMLSVFAALAEFVVVKVLDVQYQY-------QVNRIPKVLPMRISNMEKGQ-CAT-- 360

  Fly   378 DIIELQDVRMSPIPSLRRGTYNATLDSIGTETMNLGKFPPSFRITRNYGTGHSQLRRRAQRGIST 442
                        :.|...|   |......|:|      |.:...|...|.|......|.|..:|.
  Fly   361 ------------VASWEGG---AVRSRKATQT------PTTPGQTSLQGNGGPPKPARRQSLLSV 404

  Fly   443 RPRMLHALKRGASAIKATIPKIKDV--NIIDKYSRMIFPISFLAFNLGYWLFYILE 496
                         |...|...::.:  ..|||.||.:|||.|..|.|.||...:::
  Fly   405 -------------AWTDTDTGVEKIMWREIDKVSRAVFPILFFVFVLLYWPILLMK 447

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lcch3	NP_996469.1	LIC	15..493	CDD:273305	134/496 (27%)
alka	NP_610619.2	LIC	8..441	CDD:455710	135/502 (27%)