Sequence 1: | NP_996469.1 | Gene: | Lcch3 / 32554 | FlyBaseID: | FBgn0010240 | Length: | 496 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_995675.1 | Gene: | nAChRalpha6 / 34304 | FlyBaseID: | FBgn0032151 | Length: | 523 | Species: | Drosophila melanogaster |
Alignment Length: | 556 | Identity: | 106/556 - (19%) |
---|---|---|---|
Similarity: | 202/556 - (36%) | Gaps: | 144/556 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 10 SCGLFFFLLGAQLQLIRCIRKDVLAGRLENVTQTISNILQGYDIRLRPNFG-GEPLHVGMDLTIA 73
Fly 74 SFDAISEVNMDYTITMYLNQYWRDERLAFNIFGQYFDDENDDGISDV-LTLSGDFAEKIWVPDTF 137
Fly 138 FANDKNSFLHDVTERNKLVRLGGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVS 202
Fly 203 --DVVMYWKPTPVRGVEDAELPQFTIIGYETNDRKERLA------TGVYQ-------RLSLSFKL 252
Fly 253 QRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPR----- 312
Fly 313 ----ISYVKAIDIYLVM--------------------CFVFVFAA--LLEYAAVNYTY------- 344
Fly 345 ---WGK--------------RAKKKIKKVKECCPGKIGKSERSETCSTT--EDIIELQDVRMSPI 390
Fly 391 PSLRRGTYNATLDSIGTETMNLGKFPPSFRITRNYGTGHSQLRRRAQRGISTRPRMLHALKRGAS 455
Fly 456 AIKATIPKIKD-----------VNIIDKYSRMIFPI 480 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lcch3 | NP_996469.1 | LIC | 15..493 | CDD:273305 | 103/551 (19%) |
Neur_chan_LBD | 47..256 | CDD:280998 | 52/225 (23%) | ||
Neur_chan_memb | 263..490 | CDD:280999 | 44/286 (15%) | ||
nAChRalpha6 | NP_995675.1 | LIC | 11..517 | CDD:273305 | 105/553 (19%) |
LGIC_ECD_nAChR | 55..236 | CDD:349798 | 45/206 (22%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45447308 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18945 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.030 |