Sequence 1: | NP_996469.1 | Gene: | Lcch3 / 32554 | FlyBaseID: | FBgn0010240 | Length: | 496 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_058991.2 | Gene: | Gabra5 / 29707 | RGDID: | 61859 | Length: | 464 | Species: | Rattus norvegicus |
Alignment Length: | 467 | Identity: | 166/467 - (35%) |
---|---|---|---|
Similarity: | 230/467 - (49%) | Gaps: | 78/467 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 41 TQTISNILQGYDIRLRPNFGGEPLHVGMDLTIASFDAISEVNMDYTITMYLNQYWRDERLAFNIF 105
Fly 106 GQYFDDENDDGISDVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLGGDGAVTYGMRF 170
Fly 171 TTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWKPTPVRGVEDAE----LPQFTIIGYET 231
Fly 232 NDRKERLATGVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTV 296
Fly 297 LTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY---TYWGKRAKKKIKKVKE 358
Fly 359 CCPGKIGKSER------SETCSTTEDIIELQDVRMSPIPSLRRGTYNATLDSIGTETMNLGKFPP 417
Fly 418 SFRITRNYGTGHSQLRRRAQRGISTRPRMLHALKRGASAIKATIPKIKDVNIIDKYSRMIFPISF 482
Fly 483 LAFNLGYWLFYI 494 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lcch3 | NP_996469.1 | LIC | 15..493 | CDD:273305 | 165/464 (36%) |
Neur_chan_LBD | 47..256 | CDD:280998 | 78/212 (37%) | ||
Neur_chan_memb | 263..490 | CDD:280999 | 78/235 (33%) | ||
Gabra5 | NP_058991.2 | LIC | 15..450 | CDD:273305 | 165/464 (36%) |
LGIC_ECD_GABAAR_A5 | 58..256 | CDD:349839 | 76/209 (36%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 382..414 | 8/75 (11%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3644 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |