Sequence 1: | NP_996469.1 | Gene: | Lcch3 / 32554 | FlyBaseID: | FBgn0010240 | Length: | 496 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_058985.1 | Gene: | Gabrd / 29689 | RGDID: | 61901 | Length: | 449 | Species: | Rattus norvegicus |
Alignment Length: | 474 | Identity: | 180/474 - (37%) |
---|---|---|---|
Similarity: | 265/474 - (55%) | Gaps: | 63/474 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 31 DVLAGRLE-NVTQTISNILQGYDIRLRPNFGGEPLHVGMDLTIASFDAISEVNMDYTITMYLNQY 94
Fly 95 WRDERLAFNIFGQYFDDENDDGISDVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLG 159
Fly 160 GDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWKPT--PVRGVEDAELP 222
Fly 223 QFTIIGYE-TNDRKERLATGVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 286
Fly 287 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYTY-WGKRAK 350
Fly 351 KKIKKVKECCPGKIGKSERSETCSTTEDIIELQDVRMSPIPSLRRGTYNA----TLDSIGTETMN 411
Fly 412 LGKFPPSFRITRNYGTGHSQLRRRAQRGISTRPRMLHALKRGASAIKATIPKIKDVNIIDKYSRM 476
Fly 477 IFPISFLAFNLGYWLFYIL 495 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lcch3 | NP_996469.1 | LIC | 15..493 | CDD:273305 | 179/470 (38%) |
Neur_chan_LBD | 47..256 | CDD:280998 | 89/211 (42%) | ||
Neur_chan_memb | 263..490 | CDD:280999 | 82/231 (35%) | ||
Gabrd | NP_058985.1 | LGIC_ECD | 63..246 | CDD:355788 | 82/194 (42%) |
LGIC_TM | 249..>337 | CDD:365787 | 50/87 (57%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3644 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D226476at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.920 |