Sequence 1: | NP_996469.1 | Gene: | Lcch3 / 32554 | FlyBaseID: | FBgn0010240 | Length: | 496 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_002033.2 | Gene: | GABRR1 / 2569 | HGNCID: | 4090 | Length: | 479 | Species: | Homo sapiens |
Alignment Length: | 487 | Identity: | 187/487 - (38%) |
---|---|---|---|
Similarity: | 269/487 - (55%) | Gaps: | 74/487 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 20 AQLQLIRCIRK--DVLAGRLENVTQTISNILQGYDIRLRPNFGGEPLHVGMDLTIASFDAISEVN 82
Fly 83 MDYTITMYLNQYWRDERLAFNIFGQYFDDENDDGISDVLTLSGDFAEKIWVPDTFFANDKNSFLH 147
Fly 148 DVTERNKLVRLGGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWKP-- 210
Fly 211 TPVRGVEDAELPQFTIIGYETNDRKERLA----TGVYQRLSLSFKLQRNIGYFVFQTYLPSILIV 271
Fly 272 MLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 336
Fly 337 YAAVNY-TYWGKRAKKKIKKVKECCPGKIGKSERSETCSTTEDIIELQDVRMSPIPSLRRGTYN- 399
Fly 400 ---ATLDSIGTETMNLGKFPPSFRITRNYGTGHSQLRRRAQRGISTRPRMLHALKRGASAIKATI 461
Fly 462 PKIKDVNIIDKYSRMIFPISFLAFNLGYWLFY 493 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lcch3 | NP_996469.1 | LIC | 15..493 | CDD:273305 | 187/485 (39%) |
Neur_chan_LBD | 47..256 | CDD:280998 | 89/214 (42%) | ||
Neur_chan_memb | 263..490 | CDD:280999 | 87/231 (38%) | ||
GABRR1 | NP_002033.2 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 32..55 | 1/1 (100%) | |
LIC | 75..478 | CDD:273305 | 182/463 (39%) | ||
Neur_chan_LBD | 76..281 | CDD:280998 | 90/220 (41%) | ||
Neur_chan_memb | 288..475 | CDD:280999 | 87/231 (38%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3644 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |