Protein Alignment Lcch3 and lgc-58

DIOPT Version :9

• Sequence 1: NP_996469.1
• Gene: Lcch3 / 32554
• FlyBaseID: FBgn0010240
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: NP_001368738.1
• Gene: lgc-58 / 191637
• WormBaseID: WBGene00001587
• Length: 553
• Species: Caenorhabditis elegans
• Alignment Length: 557
• Identity: 151/557 - (27%)
• Similarity: 245/557 - (43%)
• Gaps: 119/557 - (21%)

  Fly    32 VLAGRLENVTQTISNIL----QGYDIRLRP--NFGGEPLHVGMDLTIASFDAISEVNMDYTITMY 90
            |.|.|.|.|...:.|:|    |.||.:..|  :...|...|.:.:.|....:.....||:.:.:|
 Worm    18 VEASRSEPVPIYLDNLLNAGRQVYDNQSPPVQHDKEEVTVVELAMYIEGMSSFRTQTMDFQLDVY 82

  Fly    91 LNQYWRDERLAFNIFGQYFDDENDDGISDVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKL 155
            ..|:|||.|||.|            ....||........|:|.||.:|||.:.:..|:||:.|.|
 Worm    83 FQQFWRDPRLAHN------------ETRRVLVKDKAVLHKMWKPDVYFANARIAEFHEVTQPNFL 135

  Fly   156 VRLGGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWK-PTPVRGVEDA 219
            |.:..||::.|..|.:..:.|.::|..:|||||.|.:.|.||.||...:|:.|| ..|:....:.
 Worm   136 VWIQPDGSILYDTRISMVVVCTLNLEKWPLDSQRCHLRILSYAYTTEQLVIKWKEDEPITRNPNI 200

  Fly   220 ELPQFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEA 284
            .:....|:...........:||.:..::..|.::|.|.:.|.|:|:|:.|||::||.|||::.||
 Worm   201 AMSDMHIVDLYPGLCDGNYSTGTWSCVTAEFFVKREITHHVMQSYVPTTLIVVISWFSFWLDVEA 265

  Fly   285 TSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYTY----- 344
            ..|||:|.|||:||::|.:...|.:||.:||:||||:::..|.:|||..::|:..|||..
 Worm   266 VPARVSLAITTLLTLSTQANAARMALPEVSYMKAIDVWMGACMMFVFGVMIEFTIVNYAQRQGRK 330

  Fly   345 WGK-----------------RAKKKIKK---------------------VKECCPGKIGKSE--- 368
            |.:                 .|:||..:                     :.|..|.:|..::
 Worm   331 WHRTDAEIVMASSLESVKSGNAEKKPSRGDLGAHARHLFLRLRTNERQHLVEDPPEQIAMNDTAY 395

  Fly   369 -----------------------RSETCSTTEDI-IELQDVRMSPI-----PSLRRGTYNATLDS 404
                                   ::|.....|:: .|.::..:|.:     |:.|...:|...:.
 Worm   396 DTVSQAYSNSFSDEEAAPVVQPPQNEDAEAQEEVWAEQKETNLSEVWKESDPAERLAHWNEKEND 460

  Fly   405 IGTETMNLGKFPPSFRITRNYGTGHSQLRRRAQRGISTRPRMLHALKRGASAIK---------AT 460
            ..:..|..|      |....||.......|:...  |:|.:     ::.:||||         :.
 Worm   461 ASSPLMGNG------RAHVRYGAAEKMKNRKCND--SSRKK-----EKWSSAIKQIQKHKRNGSV 512

  Fly   461 IPKIKDVN---IIDKYSRMIFPISFLAFNLGYWLFYI 494
            ..||...|   .||:.||.|||::|:.|||.||::|:
 Worm   513 FGKIAGRNRAKKIDQTSRWIFPLTFIIFNLTYWIYYL 549

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lcch3	NP_996469.1	LIC	15..493	CDD:273305	150/554 (27%)
		Neur_chan_LBD	47..256	CDD:280998	60/215 (28%)
		Neur_chan_memb	263..490	CDD:280999	79/313 (25%)
lgc-58	NP_001368738.1	LIC	30..548	CDD:273305	145/542 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910