Protein Alignment Lcch3 and lgc-45

DIOPT Version :9

• Sequence 1: NP_996469.1
• Gene: Lcch3 / 32554
• FlyBaseID: FBgn0010240
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: NP_001335538.1
• Gene: lgc-45 / 189345
• WormBaseID: WBGene00021146
• Length: 1046
• Species: Caenorhabditis elegans
• Alignment Length: 442
• Identity: 126/442 - (28%)
• Similarity: 183/442 - (41%)
• Gaps: 110/442 - (24%)

  Fly    59 FGGEPLHVGMDLTIASFDAISEVNMDYTITMYLNQYWRDERLAFNIFGQYFDDENDDGISDVLTL 123
            |.|..:.|...:.|.|........|||.:.:||...|||.||.     ..:|       ..:|..
 Worm   696 FQGSAVVVRFGIYIESMSNFQTSTMDYDMDIYLMMSWRDARLV-----NPYD-------KPILVK 748

  Fly   124 SGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLGGDGAVTYGMRFTTTLACMMDLHYYPLDSQ 188
            ..|..||||.||.||||.|.:..|:||..|.|:|:..||.|.|..|.....:|.:.|..||.|.|
 Worm   749 EEDILEKIWRPDPFFANAKEAEFHEVTFLNFLMRIFPDGLVLYETRVKIKPSCNLILCKYPHDKQ 813

  Fly   189 NCTVEIESYGYTVSDVVMYW---KPTPVRGVEDAELPQFTIIGYET----NDRKERLATGVYQRL 246
            .|.:.|:|:.|.|..|...|   :...:....|.:||:..|..|||    |:||    :|.:..|
 Worm   814 TCDLLIKSFAYPVETVRFEWFTRRKDAIDKNPDVKLPELYIDRYETTTCPNERK----SGAFSCL 874

  Fly   247 SLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLP 311
            ...|:|:|::|:.:.|||:|:.|.:|.|||..|:..|....|:.:.||.:||::|.|.|.|..||
 Worm   875 RAVFRLKRDVGFHIAQTYIPTSLALMFSWVGVWLPEEFMEGRIGVAITVLLTLSTESAGAREHLP 939

  Fly   312 RISYVKAIDIYLVMCFVFVFAALLEYAAVNYTYWGKRAKKKIKKVKECCPGKIGKSERSETCSTT 376
            .:||:||||::......|||..||:...|  ..:.|||            .::.|....:|...|
 Worm   940 SVSYLKAIDLWFGFITGFVFFTLLQTLFV--IGFDKRA------------NQLKKWAGRKTADIT 990

  Fly   377 EDIIELQDVRMSPIPSLRRGTYNATLDSIGTETMNLGKFPPSFRITRNYGTGHSQLRRRAQRGIS 441
            |:|.|                  |.|.                :.||.:.||
 Worm   991 EEIRE------------------ALLQ----------------KATRYHKTG------------- 1008

  Fly   442 TRPRMLHALKRGASAIKATIPKIKDVNIIDKYSRMIFPISFLAFNLGYWLFY 493
                                      ..:|.:.|:.:|:||:.|.|.|:..:
 Worm  1009 --------------------------RYLDNFCRVFYPLSFILFLLMYYFVF 1034

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lcch3	NP_996469.1	LIC	15..493	CDD:273305	126/440 (29%)
		Neur_chan_LBD	47..256	CDD:280998	68/203 (33%)
		Neur_chan_memb	263..490	CDD:280999	55/226 (24%)
lgc-45	NP_001335538.1	Neur_chan_LBD	687..>969	CDD:332142	103/290 (36%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3644
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810