Protein Alignment Lcch3 and lgc-53

DIOPT Version :9

• Sequence 1: NP_996469.1
• Gene: Lcch3 / 32554
• FlyBaseID: FBgn0010240
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: NP_741945.3
• Gene: lgc-53 / 188702
• WormBaseID: WBGene00020657
• Length: 497
• Species: Caenorhabditis elegans
• Alignment Length: 481
• Identity: 132/481 - (27%)
• Similarity: 224/481 - (46%)
• Gaps: 74/481 - (15%)

  Fly    29 RKDVLAGRLENVTQTI-SNILQ-----GYDIRLRPNFGGEPLHVGMDLTIASFDAISEVNMDYTI 87
            ||:.|......:.:|: .|:||     .||....|:  .....|.::||:.|...|||.:..:..
 Worm    69 RKERLDEPCTAINETLRKNLLQELFDDSYDKNNLPS--ANSTEVIVELTVQSITEISEFSSSFKA 131

  Fly    88 TMYLNQYWRDERLAFNIFGQYFDDENDDGISDVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTER 152
            .::.:|.|||.||.|:       |.|  .....::|:......:|.|:..|.|.|...:|....:
 Worm   132 DVWFSQIWRDPRLDFS-------DRN--YCLKNISLASHKLPTMWSPNVCFVNSKKVEIHASPSQ 187

  Fly   153 NKLVRLGGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWK-------P 210
            |.|:.:..:|.|....|.:.|..|.:||.|:|:|.|:|.:..|||.|..::|.:.|:       |
 Worm   188 NILLLIFPNGTVWLNFRVSLTGPCKLDLTYFPMDRQSCNLVFESYSYNTAEVRIVWRDWDAVTIP 252

  Fly   211 TPVRGVEDAELPQFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 275
            .|    :...||.|.::..|..:.......|::.:|.:.|..:|..||:|.|.|:|:.|.|.:||
 Worm   253 DP----DSKNLPDFELVNIEHMNATLVYTAGLWDQLEVKFTFRRLYGYYVLQAYMPTYLSVFISW 313

  Fly   276 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAV 340
            ::|||:.:|..||:.||:::::.:|.....:..:|||:|||||:||::..|..|:|.:|:|.|.|
 Worm   314 IAFWIDTKALPARITLGVSSLMALTFQFGNIVKNLPRVSYVKALDIWMFGCVGFIFLSLVELAVV 378

  Fly   341 NYTYWGKRAKKKIKKVKECCPGKIGKSERSETCSTTEDIIELQDVRMSPIPSL--RRGTYNATLD 403
            .:.       .|::          .|..|...|.  |.::...|.....:..|  :|...:.| :
 Worm   379 GFA-------DKLE----------AKRRRHNRCK--EQLMMRSDSEQQWLSRLSGQRPQVSET-N 423

  Fly   404 SIGTETMNLGKFPPSFRITRNYGTGHSQLRRRAQRGISTRPRMLHALKRGASAIKATIPKIKDVN 468
            |..|.|:.:           |.|.|:.: ||:::.            ||....::...|...:..
 Worm   424 SDATHTIQI-----------NDGNGNVR-RRKSEE------------KRQKLLLQMESPMFVNGE 464

  Fly   469 IIDKYSRMIFPISFLAFNLGYWLFYI 494
            .||:.|..:||:.|.|||:.||.:||
 Worm   465 KIDEISAKLFPLLFTAFNIFYWFYYI 490

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lcch3	NP_996469.1	LIC	15..493	CDD:273305	130/478 (27%)
		Neur_chan_LBD	47..256	CDD:280998	58/220 (26%)
		Neur_chan_memb	263..490	CDD:280999	61/228 (27%)
lgc-53	NP_741945.3	LIC	87..489	CDD:273305	126/460 (27%)
		Neur_chan_LBD	88..294	CDD:280998	58/220 (26%)
		Neur_chan_memb	302..486	CDD:280999	61/227 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910