Protein Alignment Lcch3 and lgc-32

DIOPT Version :9

• Sequence 1: NP_996469.1
• Gene: Lcch3 / 32554
• FlyBaseID: FBgn0010240
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: NP_508139.2
• Gene: lgc-32 / 188603
• WormBaseID: WBGene00020569
• Length: 390
• Species: Caenorhabditis elegans
• Alignment Length: 264
• Identity: 48/264 - (18%)
• Similarity: 102/264 - (38%)
• Gaps: 55/264 - (20%)

  Fly   132 WVPDTFFANDKNSFLHDVTERNKL--VRLGGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEI 194
            |:|..:|     .|.:::.|...|  :.:...|.:|...|...::.|......:|..:..||:
 Worm    99 WLPHVYF-----PFSYNLEESRNLYNIEIHESGNITLSKRLKQSIPCKEQSDSHPFSNNTCTL-- 156

  Fly   195 ESYGYTVSD----VVMYWKPTPVR-GVEDAELPQFTI--IGYETNDRKERLATGVYQRLSLSFKL 252
             |:.||..|    :|:  :|:.:. .||.....||.:  :.:|::...|       ||  |.:.:
 Worm   157 -SWKYTNLDNYQKIVI--EPSNLMDSVEREHSRQFILKDVTFESSGDDE-------QR--LHYTI 209

  Fly   253 QRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVK 317
            .:...|.:...:.|::|.::..|:|..:...|.:..:.|..:.:|........| :..|..:.:.
 Worm   210 TQTPQYLLLHFFFPALLFLIPPWLSLLLGPMAITRCIILMTSLILLSNHYDRNV-TVFPIDASLN 273

  Fly   318 AIDIYLVMCFVFVFAALLEYAAVN--------------------------YTYWGKRAKKKIKKV 356
            ||.|:.:..:::|...::|...:.                          |.......::|.:|.
 Worm   274 AISIWQLFTYIYVIGIVIELIIITLFASMGRSKTCCFAKRRSAKYEMEPLYEEMNDLRQRKTRKT 338

  Fly   357 KECC 360
            :.||
 Worm   339 RNCC 342

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lcch3	NP_996469.1	LIC	15..493	CDD:273305	48/264 (18%)
		Neur_chan_LBD	47..256	CDD:280998	28/132 (21%)
		Neur_chan_memb	263..490	CDD:280999	19/124 (15%)
lgc-32	NP_508139.2	LIC	61..>286	CDD:273305	41/206 (20%)
		LGIC_ECD	61..>162	CDD:355788	15/70 (21%)
		Cys-loop	140..154	CDD:349787	2/13 (15%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3644
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900