Protein Alignment Lcch3 and lgc-54

DIOPT Version :9

• Sequence 1: NP_996469.1
• Gene: Lcch3 / 32554
• FlyBaseID: FBgn0010240
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: NP_001343648.1
• Gene: lgc-54 / 188525
• WormBaseID: WBGene00020528
• Length: 493
• Species: Caenorhabditis elegans
• Alignment Length: 441
• Identity: 121/441 - (27%)
• Similarity: 205/441 - (46%)
• Gaps: 51/441 - (11%)

  Fly    66 VGMDLTIASFDAISEVNMDYTITMYLNQYWRDERLAFNIFGQYFDDENDDGISDVLTLSGDFAEK 130
            |.::..|.:...:||::..:|:.:..:|.|.|.||.|:.......:         |||.....||
 Worm    78 VSVEFGIQNIAQVSEISASFTLDLLFSQIWHDPRLRFDHLTNCLQN---------LTLGYSMVEK 133

  Fly   131 IWVPDTFFANDKNSFLHDVTERNKLVRLGGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIE 195
            :|.|:..|.|.|.:.:|.....|..:.:..:|.|....|......||:||..:|:|..||.:.||
 Worm   134 LWTPNVCFVNSKKTEIHSSPTPNIFLMIYPNGTVWVNYRLQVQSPCMVDLVLFPMDIMNCELIIE 198

  Fly   196 SYGYTVSDVVMYWKP-TPVRGVEDAELPQFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYF 259
            ||.|..:.|.:.|:. .||..:..::|..||:.|.:........|.|.:.:|::|....|..|::
 Worm   199 SYAYNAAKVKLNWREWQPVFSIAKSKLSDFTLYGLQWTKNSFEYAAGQWDQLTVSLTFSRAYGFY 263

  Fly   260 VFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLV 324
            :.|.|:|:...|.||:|||||:.:|..||:.||:::::.:|.....|..:|||:.|||:||:|:|
 Worm   264 ILQMYIPTYSSVFLSFVSFWIDLKALPARITLGVSSLMALTFQYGNVAKNLPRVGYVKSIDVYMV 328

  Fly   325 MCFVFVFAALLEYAAVNYTYWGKRAKKKIKKVKECCPGKIGKSERSETCSTTEDIIELQDVRMSP 389
            :...|:|..::|.|.|.|.......::|.::.::       |.||.......:|
 Worm   329 LTTAFIFLTMIEVAFVCYLDSENNLRRKERQAEK-------KKERVAVLQRKKD----------- 375

  Fly   390 IPSLRRGTYNAT--LDSIGTETMNLGKFPPSFRITRNYGTGHS-QLRRRAQRGISTRPRMLHALK 451
               .::..|.||  .::...|:.....:...|  ::|..|.|. .:.|:|.....:    ||||
 Worm   376 ---RKKNNYGATTVTNANAAESDLRSNYDEPF--SQNGTTSHKISISRQANNMFES----LHAL- 430

  Fly   452 RGASAIKATIPKIKDVNI------IDKYSRMIFPISFLAFNLGYWLFYILE 496
                |....:....|.|.      :||:.|..||:||...||.||.:|:.:
 Worm   431 ----AQFGLLTDDDDENTKWTAQNVDKFCRKAFPLSFCFLNLIYWCYYLYQ 477

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lcch3	NP_996469.1	LIC	15..493	CDD:273305	120/436 (28%)
		Neur_chan_LBD	47..256	CDD:280998	52/190 (27%)
		Neur_chan_memb	263..490	CDD:280999	64/235 (27%)
lgc-54	NP_001343648.1	Neur_chan_LBD	55..474	CDD:332142	120/436 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3644
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810