Protein Alignment Lcch3 and lgc-12

DIOPT Version :9

• Sequence 1: NP_996469.1
• Gene: Lcch3 / 32554
• FlyBaseID: FBgn0010240
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: NP_498656.3
• Gene: lgc-12 / 187855
• WormBaseID: WBGene00020048
• Length: 428
• Species: Caenorhabditis elegans
• Alignment Length: 379
• Identity: 80/379 - (21%)
• Similarity: 153/379 - (40%)
• Gaps: 66/379 - (17%)

  Fly    39 NVTQTISNILQGYDIRLRP--NFGGEPLHVGMDLTIASFDAISEVNMDYTITMYLNQYWRDERLA 101
            |..:.:.::::.|....||  |: ...|.|.:...|.:...::|.|....:.::..|.|:|:.|.
 Worm    28 NERELVKHLMKDYYQFTRPVKNY-SSMLTVTIMPQIYNLVEVNEQNEQIKLLIWFPQSWKDDYLV 91

  Fly   102 FNIFGQYFDDENDDGISDVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKL----VRLGGDG 162
                   :|.:..||| :.:|:.   ...:|:||.:..|       .|.|.:.|    ||:..:|
 Worm    92 -------WDPDEWDGI-EKITIP---KSMVWLPDGYIFN-------TVEETDTLDNHNVRVHYNG 138

  Fly   163 AVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWKPTPVRGVEDAELPQFTII 227
            .|.........|.|.|.:..:|.|.|.|.::..|:.|....:........|.  |:.:..::.|:
 Worm   139 KVEVDFNKLIDLICPMSVLSFPFDVQLCALQFGSWTYQSHALSFNVLEASVN--ENNKNSEWDIV 201

  Fly   228 GYETNDRKERL-----ATGVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSA 287
            .:....:..:.     ...||:.:....:::|...|::....:|:.|||.:|.:..:..|.....
 Worm   202 AFNATKKVSKYMNLIGGDNVYEEIFYFLEVRRKPLYYIVVILIPTFLIVTVSNIGLFTPHGVHGD 266

  Fly   288 R---VALGITTVLTMTTISTGVRSSLPRISY-VKAIDIYLVMCFVFVFAALLEYAAVNYT----- 343
            |   |:||:||:|||..|...|...:|:.|. :..:.:|:::.|.....|:|....:.:.
 Worm   267 REEHVSLGLTTMLTMAVILDMVTGQMPKSSEGIPLLGMYVLIEFALSIMAVLVSVLIIFAHERML 331

  Fly   344 -------YWGKRAKKKIKKVKECCPGKIGKSERSETCSTTEDIIELQDVRMSPI 390
                   :|..|...|.|       .:|..:|           :|..|:|.||:
 Worm   332 YMDAMPPFWIFRLFSKHK-------NQIPLAE-----------MEYDDLRSSPV 367

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lcch3	NP_996469.1	LIC	15..493	CDD:273305	80/379 (21%)
		Neur_chan_LBD	47..256	CDD:280998	44/219 (20%)
		Neur_chan_memb	263..490	CDD:280999	34/144 (24%)
lgc-12	NP_498656.3	Neur_chan_LBD	29..235	CDD:280998	44/226 (19%)
		Neur_chan_memb	242..>345	CDD:280999	25/102 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910