Protein Alignment Lcch3 and exp-1

DIOPT Version :9

• Sequence 1: NP_996469.1
• Gene: Lcch3 / 32554
• FlyBaseID: FBgn0010240
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: NP_495229.3
• Gene: exp-1 / 186801
• WormBaseID: WBGene00001373
• Length: 539
• Species: Caenorhabditis elegans
• Alignment Length: 464
• Identity: 134/464 - (28%)
• Similarity: 210/464 - (45%)
• Gaps: 80/464 - (17%)

  Fly    51 YDIRLRP-NFGGEPLHVGMDLTIASFDAISEVNMDYTITMYLNQYWRDERLAFNIFGQYFDDEND 114
            ||.|..| |..||..:|.:.:.:::..|:|||.|||.:.::..:.|||.||.::  .:.|.::.:
 Worm   111 YDHRQVPENEKGEATYVEVSVVVSNIRAVSEVTMDYALELFYRESWRDPRLQYD--RKLFKNKTE 173

  Fly   115 DGISDVLTLSGDFAEKIWVPDTFFAN---DKNSFLHDVTERNKLVRLGGDGAVTYGMRFTTTLAC 176
                  |.|...:...:|.||||..|   .||...:.::.|: |:||...|.:.|..|.:....|
 Worm   174 ------LALHESYTNFLWFPDTFVPNAIASKNPQRNSISHRS-LLRLDETGKLLYSRRISLVCEC 231

  Fly   177 MMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWKPTPVRGVEDA------ELPQFTIIGYETNDRK 235
            .|||..:|.|.|.|.:.|||||||...||..|.    :|...|      .||.|||.......:.
 Worm   232 TMDLTLFPFDKQLCKLGIESYGYTADHVVYKWS----KGARTALELKKIRLPDFTIQEAYVTSQM 292

  Fly   236 ERLATGVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 300
            |..|||.|.||.:.|...|:.|:...|..:||..:|:.||||.|:..|.....:   |:.:|.:|
 Worm   293 ESYATGNYSRLYVCFVFSRSSGFCFLQLIIPSTAVVITSWVSLWMETETEFQDM---ISIILAIT 354

  Fly   301 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYTYWGKRAKKKIKKVKECCPGKIG 365
            .:.......:||:||:||:||||.:||:.||.:|::.|.|.|      .::||....:.     |
 Worm   355 FLIFSYNEMMPRVSYIKAMDIYLGVCFMIVFLSLIKLALVKY------MRQKIMLTSDS-----G 408

  Fly   366 KSERSETCSTTEDIIELQDVRMSPIPSLRRGTYNATLDSIGTETMNLGKFPPSFRITRNYGTGHS 430
            .|.|                .||.:.:.:|      |.:..|..||.          ||.|.|..
 Worm   409 NSLR----------------EMSQMSTRQR------LRARKTSNMNF----------RNNGGGSI 441

  Fly   431 QLRRRAQRGIST---RPRMLHALKRGASAI-KATIPKIKDVNIIDK-------YSRMIFPISFLA 484
            .:....|:.::.   ..:|.:...:.|:.. |:.:..:.::.|..:       .|:|:|...|:.
 Worm   442 PINEEHQQMLTVPNGEDKMANGDDKEANNNGKSHLSDMLEIRITQRTMHRFHWISQMLFFFGFVI 506

  Fly   485 FNLGYWLFY 493
            |.|.|:|.|
 Worm   507 FCLFYFLIY 515

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lcch3	NP_996469.1	LIC	15..493	CDD:273305	133/462 (29%)
		Neur_chan_LBD	47..256	CDD:280998	72/214 (34%)
		Neur_chan_memb	263..490	CDD:280999	57/237 (24%)
exp-1	NP_495229.3	LIC	103..515	CDD:273305	133/462 (29%)
		Neur_chan_LBD	111..311	CDD:280998	71/212 (33%)
		Neur_chan_memb	320..>397	CDD:280999	30/85 (35%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3644
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810