Protein Alignment Lcch3 and lgc-39

DIOPT Version :9

• Sequence 1: NP_996469.1
• Gene: Lcch3 / 32554
• FlyBaseID: FBgn0010240
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: NP_504821.3
• Gene: lgc-39 / 184265
• WormBaseID: WBGene00017314
• Length: 563
• Species: Caenorhabditis elegans
• Alignment Length: 489
• Identity: 141/489 - (28%)
• Similarity: 220/489 - (44%)
• Gaps: 86/489 - (17%)

  Fly    38 ENVTQTISN--ILQGYDIRLRPNFG-GEPLHVGMDLTIASFDAISEVNMDYTITMYLNQYWRDER 99
            :.:.:.|.|  :..||::.:.|... |:...|.:.:.|.|..:....:||:.:.|||...|.|.|
 Worm   119 DRLLKVIGNGVVEDGYNMFMAPGQSQGKRTDVHVAVYIESMSSFKAQSMDFEVDMYLAMGWFDRR 183

  Fly   100 LAFNIFGQYFDDENDDGISDVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLGGDGAV 164
            ||.|.            ...:|..|...|::||.||.:|.|.|.::|.:||..|.:|.:..||.:
 Worm   184 LAHNC------------THPILVTSKLIADRIWYPDLYFVNSKYAYLQEVTTPNLMVIVYPDGLI 236

  Fly   165 TYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWKPTPVRGVEDAELPQFTIIGY 229
            ...||...||:|||||..:|||.|.|.:.|:|:.|....|.:.|:..|         |.|. ||:
 Worm   237 FKTMRLDVTLSCMMDLKLFPLDYQECPLTIQSFAYIEQIVNLTWRDDP---------PNFP-IGF 291

  Fly   230 E----------TNDRKERLATGVYQRLSLSFK-------------LQRNIGYFVFQTYLPSILIV 271
            .          ||.|..:.| |.|.    .|:             ::|.:.:.:.|||:|:.::|
 Worm   292 NPDIKLNDMQITNKRFVKCA-GPYP----MFRGEAAWSCIQGYIVMKRLVLFHIIQTYIPTGMLV 351

  Fly   272 MLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 336
            .:||:|||::..|:.||::|.||::||:||:|.|.|..||::||:||:||:|......:|..|||
 Worm   352 SISWMSFWLDPRASPARISLTITSLLTLTTMSNGARQDLPQVSYIKALDIWLTFSQALIFLVLLE 416

  Fly   337 YAAVNYTYWGKRAKKKIKKVKECCPGKIGKSERSETCSTTEDIIELQDVRMSPIPSLRRGTYNAT 401
            |:.|:| |..||       ..:|....:...||.:.|...|              ..|:...|..
 Worm   417 YSFVSY-YMTKR-------TTDCSHRNMFYEERVQECKREE--------------KARKSIVNNN 459

  Fly   402 LDSIGTET----MNLGKFPPSFRITRNYGTGHSQLRRRAQRGISTRP---RMLHALKRGASAIKA 459
            ...|...|    :|..|....|.:|.    |.|.....:...:|..|   |:...........:.
 Worm   460 KPVIANNTEGSDLNRNKKSQQFSLTH----GISACLNESSALMSVTPVPSRLFTKFDTNKPCARC 520

  Fly   460 TIPKIKDVNIIDKYSRMIFPISFLAFNLGYWLFY 493
            :....:....||:|||.:||..|..|.:.|||::
 Worm   521 SEKNERIAFKIDEYSRWLFPTVFSLFCVSYWLYF 554

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lcch3	NP_996469.1	LIC	15..493	CDD:273305	141/487 (29%)
		Neur_chan_LBD	47..256	CDD:280998	67/232 (29%)
		Neur_chan_memb	263..490	CDD:280999	68/233 (29%)
lgc-39	NP_504821.3	LIC	119..554	CDD:273305	141/487 (29%)
		Neur_chan_LBD	132..336	CDD:280998	67/230 (29%)
		Neur_chan_memb	343..551	CDD:280999	68/233 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3644
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810