Protein Alignment Lcch3 and acc-2

DIOPT Version :9

• Sequence 1: NP_996469.1
• Gene: Lcch3 / 32554
• FlyBaseID: FBgn0010240
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: NP_501567.1
• Gene: acc-2 / 183758
• WormBaseID: WBGene00008280
• Length: 445
• Species: Caenorhabditis elegans
• Alignment Length: 481
• Identity: 123/481 - (25%)
• Similarity: 199/481 - (41%)
• Gaps: 111/481 - (23%)

  Fly    27 CIRKDVLAGRLENVTQTISNILQGYDIRLRPNFGGEPLHVGMDLTIASFDAISEVNMDYTITMYL 91
            |.|...:..||.|.|        ||:....|.  .|.:.|.:::.|.:..:|.|:..|:.:.:|:
 Worm    47 CTRDTDIIDRLLNGT--------GYNKFRIPQ--EEGMTVVVEIWIQAITSIDELTNDFDMDIYI 101

  Fly    92 NQYWRDERLAFNIF----GQYFDDENDDGISDVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTER 152
            .:.|.|..|.|...    |.             |:|:....:::|.|::.|.|.|.:.:|:...|
 Worm   102 TETWLDPALNFQTMTPCKGN-------------LSLNHQVLDRLWTPNSCFINSKVAQIHNSPFR 153

  Fly   153 NKLVRLGGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWKPT--PVRG 215
            :..:.|..:|.|....|......|.:||..:|||.|.|::..||:.|...:|.|.|...  ||..
 Worm   154 SVFLMLFPNGTVMVNYRVRVKGPCSLDLSNFPLDLQKCSLIYESFNYNRQEVEMRWSDAEHPVFN 218

  Fly   216 VEDAELPQFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWI 280
            :....||.|.:...:|..|:|....|::..|.::...:|...::..|.|||:.|.:.:||:||.:
 Worm   219 LSKIMLPDFDLFEIQTERRQEPYPAGMWDELHVTIIFERRFIWYFMQAYLPTYLTIFISWISFSL 283

  Fly   281 NHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY--- 342
            ...|..||..||:.::|.:......:..:|||:||:|.||:::::...|:|.:|||.|.|.:
 Worm   284 GSRAIPARTMLGVNSLLAIVFSFGNIMRNLPRVSYIKGIDVWMLVSMTFIFCSLLELAIVGFMVR 348

  Fly   343 --TYWGKRAKKKIKKVKECCPGKIGKSERSETCSTTEDIIELQDVRMSP--IPSLRRGTYNATLD 403
              |...|:.:|||.       |.|.:.|                   ||  |.|.||
 Worm   349 DETVAKKKQQKKIS-------GNISREE-------------------SPHGIISERR-------- 379

  Fly   404 SIGTETMNLGKFPPSFRITRNYGTGHSQLRRRAQRGISTRPRMLHALKRGASAIKATIPKIKDVN 468
                     ..|||                     |.|...:.|.:...|.:..:
 Worm   380 ---------FMFPP---------------------GCSESSKSLSSCTSGWTPER---------- 404

  Fly   469 IIDKYSRMIFPISFLAFNLGYWLFYI 494
             ||..|.::||.||..||:.||.:||
 Worm   405 -IDSISSVMFPFSFFVFNIIYWFYYI 429

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lcch3	NP_996469.1	LIC	15..493	CDD:273305	121/478 (25%)
		Neur_chan_LBD	47..256	CDD:280998	53/214 (25%)
		Neur_chan_memb	263..490	CDD:280999	59/233 (25%)
acc-2	NP_501567.1	Neur_chan_LBD	51..258	CDD:308532	56/229 (24%)
		Neur_chan_memb	267..>347	CDD:308533	29/79 (37%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3644
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810