Protein Alignment Lcch3 and lgc-48

DIOPT Version :9

• Sequence 1: NP_996469.1
• Gene: Lcch3 / 32554
• FlyBaseID: FBgn0010240
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: NP_506308.3
• Gene: lgc-48 / 183638
• WormBaseID: WBGene00008223
• Length: 366
• Species: Caenorhabditis elegans
• Alignment Length: 364
• Identity: 97/364 - (26%)
• Similarity: 176/364 - (48%)
• Gaps: 34/364 - (9%)

  Fly    12 GLFFFLLGAQLQLIR--CIRKDVLAGRLENVTQTISNILQ--GYDIRLRPNFGGEPLHVGMDLTI 72
            ||...:||.::..:|  |:          |..|.:..:|:  ||.....|...|  :.|.::..|
 Worm     8 GLLVAVLGEEVHELRSECL----------NEAQLMEKLLKGSGYSKHKIPRENG--ITVSVEFWI 60

  Fly    73 ASFDAISEVNMDYTITMYLNQYWRDERLAFNIFGQYFDDENDDGISDVLTLSGDFAEKIWVPDTF 137
            ...::|||:..|:.:.:::|:.|.|..|.|...|         .....|||......|:|.|:|.
 Worm    61 QEINSISEMTNDFELELFINEMWTDPSLRFPHLG---------ACKANLTLDQQTLTKLWTPNTC 116

  Fly   138 FANDKNSFLHDVTERNKLVRLGGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVS 202
            |.|.|.:.:::.:.:|..:.|..:|.|....|.....||.|||..:|:|:|:|.:..:|:.|...
 Worm   117 FVNSKFAEIYESSFQNVFLTLFDNGTVWVNYRVRVKGACNMDLVDFPMDTQSCRLNYQSFTYNNE 181

  Fly   203 DVVMYW--KPTPVRGVEDAELPQFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFVFQTYL 265
            :|.:.|  :.:||..:::..:..|.:........|.....|::..|.::|..:|...::..|.||
 Worm   182 EVRLQWNSQRSPVFALQEIRIADFWLKDITPAVIKRDYPAGLWDELVVTFVFERRYMWYFLQAYL 246

  Fly   266 PSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFV 330
            |:...:.:||::|.:..:|.:.|..:|:..:|:|......:..:|||:||:||||::::....||
 Worm   247 PTFFSIFISWIAFSLGPQAITPRTMIGVNALLSMIFHFGSIMKNLPRVSYIKAIDVWMLSSMTFV 311

  Fly   331 FAALLEYAAVNYTYWGKRAKKKIKKVKECCPGKIGKSER 369
            |.:|:|.|.|.|       |.:|::.||....|:.|..|
 Worm   312 FLSLIELAIVGY-------KLQIQREKEHVIEKVDKIAR 343

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lcch3	NP_996469.1	LIC	15..493	CDD:273305	95/361 (26%)
		Neur_chan_LBD	47..256	CDD:280998	53/212 (25%)
		Neur_chan_memb	263..490	CDD:280999	35/107 (33%)
lgc-48	NP_506308.3	Neur_chan_LBD	28..237	CDD:280998	54/219 (25%)
		Neur_chan_memb	245..>323	CDD:280999	27/77 (35%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3644
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810