Protein Alignment Lcch3 and glc-4

DIOPT Version :9

• Sequence 1: NP_996469.1
• Gene: Lcch3 / 32554
• FlyBaseID: FBgn0010240
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: NP_495489.2
• Gene: glc-4 / 182971
• WormBaseID: WBGene00001594
• Length: 500
• Species: Caenorhabditis elegans
• Alignment Length: 504
• Identity: 152/504 - (30%)
• Similarity: 238/504 - (47%)
• Gaps: 106/504 - (21%)

  Fly    43 TISNILQGYDIRLRPNFGGEPLH-------VGMDLTIASFDAISEVNMDYTITMYLNQYWRDERL 100
            |:.::||.||..:||: |..|.:       |...|.|.|..|:||.||::.......|.|.|:||
 Worm    47 TVCDLLQDYDAAVRPS-GRTPYNDTRGAVMVTTSLNIRSISAVSEKNMEFVAQFRFRQEWYDDRL 110

  Fly   101 AFNIFGQYFDDENDDGISDVLTLSGDFA----------EKIWVPDTFFANDKNSFLHDVTERNKL 155
            .|              |.....||.|:.          :.:|:|||||.|:||.:.|.:.:.|:.
 Worm   111 RF--------------IEHQGLLSSDYRNFEFIHVARDQSLWIPDTFFQNEKNGWYHMLNQENRF 161

  Fly   156 VRLGGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWKPTPVRGVEDAE 220
            :::..||.:.|..|.|..|||.|.|..||:|.|||.:...||.||.:|:...|....::..|.|.
 Worm   162 LKIRSDGKLIYDRRLTLHLACSMHLSRYPMDHQNCEIAFASYAYTTADIEYIWDVPAIQIHEGAN 226

  Fly   221 --LPQFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHE 283
              ||.|.|..::......:..||.|..|.:..:|.|...:|:.|.|:||.::|.::|||:||:.:
 Worm   227 GALPNFEIASFKNASCTSKTNTGTYSCLKVEIRLNRVFSFFLLQLYIPSSMLVGVAWVSYWIDWK 291

  Fly   284 ATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYTYWGKR 348
            :|:|||.|.|.|:|||.|.|..:.|:||.:||.|:|||::..|.||:|.:|:|||.|||.  |..
 Worm   292 STAARVPLAIVTLLTMITTSHAINSNLPPVSYAKSIDIWVGACVVFIFFSLIEYAVVNYV--GIL 354

  Fly   349 AKKKIKKVKECCPGKI---------GKSERSETCSTTE----------DIIELQDVRMSPIPSLR 394
            .:.:..|...|...::         |:|.:|.|.|..|          ..:|:|:.....|..:.
 Worm   355 DEHRQMKKAACNRSRLSNVIENDNFGESLQSLTFSPQEKKRLIRRRPKKNMEMQEGDFEAIEMVD 419

  Fly   395 RG------------TYNATLDSIGTETMNLGKFPPSFRITRNYGTGHSQLRRRAQRGISTRPRML 447
            ||            |::.|     |:.:.:|:                  |:|.:
 Worm   420 RGPPRSAGLMEEGWTFHDT-----TDLVYIGQ------------------RKRVE---------- 451

  Fly   448 HALKRGASAIKATIPKIKDVNIIDKYSRMIFPISFLAFNLGYWLFYILE 496
              |.|..|.:.:. .:.:.::||   :|:|||::|:.||..||..|:.|
 Worm   452 --LVRWCSVLSSR-GRAERIDII---ARIIFPLAFILFNFAYWSIYLEE 494

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lcch3	NP_996469.1	LIC	15..493	CDD:273305	150/499 (30%)
		Neur_chan_LBD	47..256	CDD:280998	72/227 (32%)
		Neur_chan_memb	263..490	CDD:280999	73/257 (28%)
glc-4	NP_495489.2	LIC	26..491	CDD:273305	150/499 (30%)
		Neur_chan_LBD	50..258	CDD:280998	70/222 (32%)
		Neur_chan_memb	271..488	CDD:280999	73/257 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3644
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810