Protein Alignment Lcch3 and acr-3

DIOPT Version :9

• Sequence 1: NP_996469.1
• Gene: Lcch3 / 32554
• FlyBaseID: FBgn0010240
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: NP_509129.1
• Gene: acr-3 / 180937
• WormBaseID: WBGene00000043
• Length: 487
• Species: Caenorhabditis elegans
• Alignment Length: 387
• Identity: 78/387 - (20%)
• Similarity: 144/387 - (37%)
• Gaps: 71/387 - (18%)

  Fly    44 ISNILQGYDIRLRP--NFGGEPLHVGMDLTIASFDAISEVNMDYTITMYLNQYWRDERLAFNIFG 106
            :|.|..||:..:||  |....|:.|...|.......:.|.|......::....|.|       :.
 Worm    30 LSYIFDGYNSLIRPVLNASSPPIEVFFSLAFVLLINVDEKNQIMQTNVWPTMKWND-------YQ 87

  Fly   107 QYFDDENDDGISDVLTLSGDFAEKIWVPD-TFFANDKNSFLHDVTERNKLVRLGGDGAVTYGMRF 170
            ..:|....|||..:...    .:|:|:|| ..|.|...::|..... |.:|...||  :.:....
 Worm    88 MQWDPREFDGIKTIRVP----PDKVWLPDIVLFNNADGNYLVSFYS-NVVVEHTGD--MLWVPPA 145

  Fly   171 TTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWKPTPVRGVEDAELPQFTIIGYETNDRK 235
            ....:|::|:.::|.|.|.|::...|:.:...::.:.:    :.|....||..:
 Worm   146 VYKSSCLIDVEFFPFDEQVCSLTFGSWTFRKDELQLSY----LSGKRHVELNDY----------- 195

  Fly   236 ERLATGVY-------------QRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSA 287
              |.:||:             .::|...|::|...::.....:|::|:..||.:.|::..| :|.
 Worm   196 --LPSGVWDLIDAPGLLIDERSKISYQIKIRRKALFYTVILIMPTVLMAFLSMMVFYLPAE-SSE 257

  Fly   288 RVALGITTVLTMTTISTGVRSSL-PRISYVKAIDIYLVMCFVFVFAALLEYAAVNYTY------- 344
            ::.|.|:.:|.:......|...| |..|.:..:..||:|.|:.....::....:...|
 Worm   258 KITLAISILLALVVFLLVVSKILPPTSSTIPLMAKYLLMTFIMNMITIMVSVIIINVYFRGPATH 322

  Fly   345 ----WGKRAKKKIKKV-----------KECCPGKIGKSERSETCSTTEDIIELQDVRMSPIP 391
                |.|....|...|           ||....|..|.||....|..:...:..|.::|..|
 Worm   323 IMPNWVKTVFLKFLPVLFVMRRPESTEKELAKMKREKRERRSMKSALKTFFKRNDAKISEQP 384

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lcch3	NP_996469.1	LIC	15..493	CDD:273305	78/387 (20%)
		Neur_chan_LBD	47..256	CDD:280998	44/224 (20%)
		Neur_chan_memb	263..490	CDD:280999	33/152 (22%)
acr-3	NP_509129.1	LIC	5..460	CDD:273305	78/387 (20%)
		Neur_chan_LBD	26..226	CDD:280998	44/226 (19%)
		Neur_chan_memb	234..456	CDD:280999	33/152 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910