Protein Alignment Lcch3 and lgc-44

DIOPT Version :9

• Sequence 1: NP_996469.1
• Gene: Lcch3 / 32554
• FlyBaseID: FBgn0010240
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: NP_505954.2
• Gene: lgc-44 / 179600
• WormBaseID: WBGene00009790
• Length: 618
• Species: Caenorhabditis elegans
• Alignment Length: 457
• Identity: 103/457 - (22%)
• Similarity: 173/457 - (37%)
• Gaps: 117/457 - (25%)

  Fly    51 YDIRLRPNFGGEPLHVGMDLTIASFDAISEVN------MDYTITMYLNQYWRDERLAFNIFGQYF 109
            ||.|..|:     |||...:|:....|:..::      |||.:..::...|.|.||
 Worm   259 YDARQPPS-----LHVDDTVTVKVGIAVQSMSNFELSTMDYDLDAWVRMSWIDPRL--------- 309

  Fly   110 DDENDDGISDVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLGGDGAVTYGMR-FTTT 173
               ..|....:|.....|.:.||.||..|.|.|.|..|.||..|..:.:..||.:...|| :...
 Worm   310 ---RHDLSRPILVNDYTFLKMIWRPDPIFTNSKYSTFHKVTYLNFYLFIFPDGKIFMDMRVYLKP 371

  Fly   174 LACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWKPTPVRGV---EDAELPQFTIIGYETNDRK 235
            .|..:.|..||.|:...:::|.|.|:|...|.:.|.......:   ::.::|:.:|.....:...
 Worm   372 TAAQIVLCKYPHDNPAVSLKISSMGFTQDVVKLEWFSDTNDAIWIEKNVKIPELSIRHLHPDTCN 436

  Fly   236 ERLATGVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 300
            ....:|||..|...|.:.|.:||.:..||:|:.:.|:.||:|.|:..|....|:.:.:|..||::
 Worm   437 GVRKSGVYSCLEAKFYMHREVGYHIANTYIPTAICVVFSWISVWLPEEFVEGRIFVSLTVFLTLS 501

  Fly   301 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE-YAAVNYTYWGKRAKKKIKKVKECCPGKI 364
            ..:...:..||::||||||||:......|||..:|: ...::..:..||.:.|
 Worm   502 AENNSAKEELPKVSYVKAIDIWFGFTSTFVFLTMLQALVVISLEHNSKRLRLK------------ 554

  Fly   365 GKSERSETCSTTEDIIELQDVRMSPIPSLRRGTYNATLDSIGTETMNLGKFPPSFRITRNYGTGH 429
                                             :...||......|.     .|..::|.|   |
 Worm   555 ---------------------------------FENNLDGYSKYQMT-----KSMLLSRYY---H 578

  Fly   430 SQLRRRAQRGISTRPRMLHALKRGASAIKATIPKIKDVNIIDKYSRMIFPISFLAFNLGYWLFYI 494
            ...|:                                   ||.:.::::|:.||.| |.:::|.|
 Worm   579 RMARQ-----------------------------------IDTFCKVMYPVIFLLF-LMFYVFVI 607

  Fly   495 LE 496
            .:
 Worm   608 TQ 609

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lcch3	NP_996469.1	LIC	15..493	CDD:273305	101/452 (22%)
		Neur_chan_LBD	47..256	CDD:280998	54/214 (25%)
		Neur_chan_memb	263..490	CDD:280999	45/227 (20%)
lgc-44	NP_505954.2	Neur_chan_LBD	259..>417	CDD:280998	46/174 (26%)
		Neur_chan_memb	464..>550	CDD:280999	27/85 (32%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3644
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810