Protein Alignment Lcch3 and lgc-46

DIOPT Version :9

• Sequence 1: NP_996469.1
• Gene: Lcch3 / 32554
• FlyBaseID: FBgn0010240
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: NP_497338.2
• Gene: lgc-46 / 175279
• WormBaseID: WBGene00022106
• Length: 508
• Species: Caenorhabditis elegans
• Alignment Length: 504
• Identity: 122/504 - (24%)
• Similarity: 213/504 - (42%)
• Gaps: 98/504 - (19%)

  Fly    36 RLENVTQTISN-------ILQGYDIRLRPNFGGEPLHVGMDLTIASFDAISEVNMDYTITMYLNQ 93
            ::|..|:..:|       |:..|:   |....|..:.|.:::.:.....||::..|:.:.:|:.:
 Worm    55 KVERATKNCANDSFILGTIMSNYN---RHKIPGGQVDVEVEVWVQEITTISDITSDFQLDIYIYE 116

  Fly    94 YWRDERLAFNIFG--QYFDDENDDGISDVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLV 156
            .|.|..|.:....  :|           .|:|:....||:|.|::.|.|.|.:.:|.....|..:
 Worm   117 TWYDPALNYAFMNPCKY-----------NLSLNSVLLEKLWTPNSCFINSKTADIHKSPFPNIFL 170

  Fly   157 RLGGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWKPTPVRGVED-AE 220
            .:..:|.|....|......|:|||..:|.|:..|::..||:.|...:|.|.|....|:.:.| .|
 Worm   171 MIYANGTVWTNYRLKLQGPCIMDLTKFPFDNVTCSLTFESFNYNTDEVKMDWSVNGVQKMRDKME 235

  Fly   221 LPQFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEAT 285
            |..:.::........|....|.:..|::||:.:|..|:::.|.|||:.|.:.:||:||.:..:|.
 Worm   236 LADYELVDIHKIRTTEEYPAGYWHELTMSFEFKRRAGWYILQAYLPTYLTICISWISFALGSKAI 300

  Fly   286 SARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYTYWGKRAK 350
            .||..||:.::|.||.....:..:|||:|||||||::::.|..|||.:|||.|.|.|.  .:..:
 Worm   301 PARTMLGVNSLLAMTFQFGNIIRNLPRVSYVKAIDVWMLSCMTFVFCSLLELAWVGYL--SREEE 363

  Fly   351 KKIKKV---------KECCPGKIGKSERSETCSTTEDIIELQDVRMSPIPSLRRGTYNATLDSIG 406
            ....|.         |.|.|..:.::..:.:....:.  :.::...|.:.|||...|
 Worm   364 PTSAKCLQPSAQVAPKPCHPPPVQQNANNSSVHRRQK--QPKNEEESALLSLRDNDY-------- 418

  Fly   407 TETMNLGKFPPSFRITRNYGTGHSQLRRRAQRGISTRPRMLHALKRGASAIKA------------ 459
                  |..||.|.:..|                     :.:|:|..:|:...
 Worm   419 ------GYIPPGFGLNGN---------------------VANAMKSFSSSCSCEPTNVVNLMLDE 456

  Fly   460 --TIPKIKDVNI------------IDKYSRMIFPISFLAFNLGYWLFYI 494
              |||.....::            ||..|..:||..|:.||:.||..|:
 Worm   457 AETIPTSTSSSLSRKQRREILAHKIDSVSVFMFPFLFVLFNIAYWQHYL 505

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lcch3	NP_996469.1	LIC	15..493	CDD:273305	121/501 (24%)
		Neur_chan_LBD	47..256	CDD:280998	50/211 (24%)
		Neur_chan_memb	263..490	CDD:280999	64/261 (25%)
lgc-46	NP_497338.2	Neur_chan_LBD	73..504	CDD:332142	118/483 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3644
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810