Protein Alignment Lcch3 and lgc-34

DIOPT Version :9

• Sequence 1: NP_996469.1
• Gene: Lcch3 / 32554
• FlyBaseID: FBgn0010240
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: NP_493752.1
• Gene: lgc-34 / 173443
• WormBaseID: WBGene00020836
• Length: 390
• Species: Caenorhabditis elegans
• Alignment Length: 513
• Identity: 117/513 - (22%)
• Similarity: 182/513 - (35%)
• Gaps: 157/513 - (30%)

  Fly    13 LFFFLLGAQLQLIRC-IRKDVLAGRLENVTQTISNILQGYDIRLRPNFGGEPLHVGMD------L 70
            :|.||:  .|.:..| .:|...:.||....|.:..||..||...||     |:....|      :
 Worm     4 IFLFLV--LLSIGVCSAQKAFHSRRLGTEGQIVGRILSEYDSSSRP-----PVRDHADNSAILVI 61

  Fly    71 TIASFDAISEVNMDYTITMYLNQYWRDERLAFNIFGQYFDDENDDGISDVLTLSGDFAEKIWVPD 135
            |....:.:...|....:.:||.|.|:|.||.:::       :..:|| |.:.|.|:  .|||.||
 Worm    62 TNIFINRLIWHNNYAEVDLYLRQQWQDSRLKYDV-------DTREGI-DEIRLPGN--RKIWEPD 116

  Fly   136 TFFA-------NDKNSFLHDVTERNKLVRLGG----DGAVTYGMRFTTTLACMMDLHYYPLDSQN 189
            |:|.       |:||| .|.|.|.:..:|...    :....||..|..|            :|:.
 Worm   117 TYFTSGKELSRNEKNS-KHIVVEPSGYIRSSERVLLELPYAYGTMFPFT------------NSRQ 168

  Fly   190 CTVEIESYGYTVSDVVMYWKPTPVRGVEDAELPQFTIIGYET------NDRKERLATGVYQRLSL 248
            .|:::.||.|.:.|:|..|..:|.. |...|:.|..:.|..|      .|.......|||..:..
 Worm   169 FTIKLGSYNYDIDDIVYLWANSPPL-VNPIEVSQDLLKGDLTFEEASAGDCVGNYTVGVYSCIDA 232

  Fly   249 SFKLQRNIGYFVFQT-------YLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGV 306
            ..       ||...|       :|||:.:::.||:.|||:...:..|..........:......:
 Worm   233 HV-------YFSASTISGLMSWFLPSLFLLIGSWLHFWIHGSWSVPRTISAAVPFFILAAYYIFM 290

  Fly   307 RSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYTYWGKRAKKKIKKVKECCPGKIGKSERSE 371
            |..    ||.:|...:|..|.|..|.:.:||..|                 .||.|:  :|.|.:
 Worm   291 RED----SYTQAQGAWLAFCLVLTFFSFVEYFLV-----------------ICCGGR--RSIRYK 332

  Fly   372 TCSTTEDIIELQDVRMSPIPSLRRGTYNATLDSIGTETMNLGKFPPSFRITRNYGTGHSQLRRRA 436
            |....||         .|:.:.:             ||:.:.           |..|.:..|
 Worm   333 TLGPQED---------HPMGAAK-------------ETVEVA-----------YNEGCASFR--- 361

  Fly   437 QRGISTRPRMLHALKRGASAIKATIPKIKDVNIIDKYSRMIFPISFLAFNLGYWLFYI 494
                                         |.|.||..||:.|||..:.|.:.|::|.:
 Worm   362 -----------------------------DNNGIDVISRVAFPIVTIVFLIIYFIFIV 390

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lcch3	NP_996469.1	LIC	15..493	CDD:273305	115/508 (23%)
		Neur_chan_LBD	47..256	CDD:280998	59/231 (26%)
		Neur_chan_memb	263..490	CDD:280999	45/233 (19%)
lgc-34	NP_493752.1	LIC	1..388	CDD:273305	116/509 (23%)
		LGIC_ECD_anion	58..237	CDD:349788	52/209 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3644
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810