Protein Alignment Lcch3 and Gabrr2

DIOPT Version :9

• Sequence 1: NP_996469.1
• Gene: Lcch3 / 32554
• FlyBaseID: FBgn0010240
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: NP_032102.2
• Gene: Gabrr2 / 14409
• MGIID: 95626
• Length: 490
• Species: Mus musculus
• Alignment Length: 450
• Identity: 178/450 - (39%)
• Similarity: 259/450 - (57%)
• Gaps: 56/450 - (12%)

  Fly    48 LQGYDIRLRPNFGGEPLHVGMDLTIASFDAISEVNMDYTITMYLNQYWRDERLAFNIFGQYFDDE 112
            ::.:|..:||.|||..:.||:|:.:.|.|:||||:||:|:|:||..|||||||||
Mouse    86 VEDHDFTMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWRDERLAF---------- 140

  Fly   113 NDDGISDVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLGGDGAVTYGMRFTTTLACM 177
             ....:..:|..|...:||||||.||.:.|.||:||.|..|.::|:..||.|.|.||.|.|..|.
Mouse   141 -PSSSNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSMRITVTAMCN 204

  Fly   178 MDLHYYPLDSQNCTVEIESYGYTVSDVVMYWK--PTPVRGVEDAELPQFTIIGYETNDRKERLA- 239
            ||..::|||||.|::|:|||.||..|:::|||  ...::..|...|.||.|..:.|.   .|||
Mouse   205 MDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTT---SRLAF 266

  Fly   240 ---TGVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTT 301
               ||.|.||.::|.|:|:|.:|:.|||.|:.|:||||||||||:|.|..|||:|||.|||||:|
Mouse   267 YSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDHRAVPARVSLGIMTVLTMST 331

  Fly   302 ISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-TYWGKRAKKKIKKVKECCPGKIG 365
            |.|||.:|:||:||::|:||||.:.|||||.::|||||||| |...::.::|.::...|..|.:
Mouse   332 IITGVNASMPRVSYIRAVDIYLWVSFVFVFLSVLEYAAVNYLTTLQEQKERKFREKLPCMCGML- 395

  Fly   366 KSERSETCSTTEDIIELQDVRMSPIPSLRRGTYNATLDSIGTETMNLGKFPPSFRITRNYGTGHS 430
               .|.|                   .:..|:|:.      :|..:|..:|.|..:.......:.
Mouse   396 ---HSRT-------------------MMLDGSYSE------SEANSLAGYPRSHILPEEERPDNI 432

  Fly   431 QLRRRAQRGISTRPRMLHALKRGASAIKATIPKIKDVNIIDKYSRMIFPISFLAFNLGYW 490
            .:.      ::....:..:.|:|....:..:...::.:.||||||:|||..::.|||.||
Mouse   433 VVH------LALNSELTSSRKKGLLKGQMGLYIFQNTHAIDKYSRLIFPAFYIVFNLIYW 486

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lcch3	NP_996469.1	LIC	15..493	CDD:273305	177/449 (39%)
		Neur_chan_LBD	47..256	CDD:280998	92/213 (43%)
		Neur_chan_memb	263..490	CDD:280999	81/227 (36%)
Gabrr2	NP_032102.2	LIC	74..489	CDD:273305	177/449 (39%)
		Neur_chan_LBD	87..286	CDD:280998	92/212 (43%)
		Neur_chan_memb	293..486	CDD:280999	81/227 (36%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3644
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR18945
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.910