Sequence 1: | NP_996469.1 | Gene: | Lcch3 / 32554 | FlyBaseID: | FBgn0010240 | Length: | 496 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_032101.3 | Gene: | Gabrr1 / 14408 | MGIID: | 95625 | Length: | 480 | Species: | Mus musculus |
Alignment Length: | 453 | Identity: | 178/453 - (39%) |
---|---|---|---|
Similarity: | 257/453 - (56%) | Gaps: | 62/453 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 48 LQGYDIRLRPNFGGEPLHVGMDLTIASFDAISEVNMDYTITMYLNQYWRDERLAFNIFGQYFDDE 112
Fly 113 NDDGISDVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLGGDGAVTYGMRFTTTLACM 177
Fly 178 MDLHYYPLDSQNCTVEIESYGYTVSDVVMYWKP--TPVRGVEDAELPQFTIIGYETNDRKERLA- 239
Fly 240 ---TGVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTT 301
Fly 302 ISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-TYWGKRAKKKIKKVKECCPGKIG 365
Fly 366 KSERSETCSTTEDIIELQDVRMSPIPSLRRGTYNATLDSIGTETMNLGKFPPSFRITRNYGTGHS 430
Fly 431 QLRRRAQRGISTRPRMLHALKRGASAIKATIPKIKDVNIIDKYSRMIFPISFLAFNLGYWLFY 493 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lcch3 | NP_996469.1 | LIC | 15..493 | CDD:273305 | 178/451 (39%) |
Neur_chan_LBD | 47..256 | CDD:280998 | 89/213 (42%) | ||
Neur_chan_memb | 263..490 | CDD:280999 | 84/227 (37%) | ||
Gabrr1 | NP_032101.3 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 29..67 | ||
LIC | 76..479 | CDD:273305 | 178/451 (39%) | ||
Neur_chan_LBD | 77..282 | CDD:280998 | 89/213 (42%) | ||
Neur_chan_memb | 289..476 | CDD:280999 | 84/227 (37%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3644 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.910 |