Protein Alignment Lcch3 and Glra3

DIOPT Version :9

• Sequence 1: NP_996469.1
• Gene: Lcch3 / 32554
• FlyBaseID: FBgn0010240
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: NP_446176.3
• Gene: Glra3 / 114516
• RGDID: 621229
• Length: 480
• Species: Rattus norvegicus
• Alignment Length: 504
• Identity: 186/504 - (36%)
• Similarity: 272/504 - (53%)
• Gaps: 87/504 - (17%)

  Fly    12 GLFFFLLGAQLQLIRCIRKDVLAGRLENVTQTISNIL-------QGYDIRLRPNFGGEPLHVGMD 69
            |.:|:.....|.|:  ..|:..:.|..:...:.|:.|       .|||.|:||||.|.|::|..:
  Rat    29 GFYFWEAALLLSLV--ATKETNSARSRSAPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVTCN 91

  Fly    70 LTIASFDAISEVNMDYTITMYLNQYWRDERLAFNIFGQYFDDENDDGISDVLTLSGDFAEKIWVP 134
            :.|.||.:|:|..|||.:.::|.|.|.|.|||::   :|.||.        |.|.....:.||.|
  Rat    92 IFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYS---EYPDDS--------LDLDPSMLDSIWKP 145

  Fly   135 DTFFANDKNSFLHDVTERNKLVRLGGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGY 199
            |.||||:|.:..|:||..|||:|:..:|.|.|.:|.|.||:|.|||..:|:|.|.|.:::||:||
  Rat   146 DLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGY 210

  Fly   200 TVSDVVMYWK-PTPVRGVEDAELPQFTIIGYETNDRK---ERLATGVYQRLSLSFKLQRNIGYFV 260
            |::|::..|: ..||:..|...||||.:  .|..|.:   :...||.:..:.:.|.|:|.:||::
  Rat   211 TMNDLIFEWQDEAPVQVAEGLTLPQFLL--KEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYL 273

  Fly   261 FQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVM 325
            .|.|:||:|||:|||||||||.:|..|||||||||||||||.|:|.|:|||::||||||||::.:
  Rat   274 IQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAV 338

  Fly   326 CFVFVFAALLEYAAVNYTYWGKRAKKKIKKVKECCPGKIG--KSERSETCSTTEDIIELQDVRMS 388
            |.:|||:|||||||||:.   .|..|::.:.:.....|..  ..|:....|.|:|     :||.|
  Rat   339 CLLFVFSALLEYAAVNFV---SRQHKELLRFRRKRKNKTEAFALEKFYRFSDTDD-----EVRES 395

  Fly   389 PIPSLRRGTYNATLDSIGTETMNLGKFPPSFRITRNYGTGHSQLRRRAQRGISTRPRMLHALKRG 453
                  |.::.|                        ||.|..   .:|:.|:         :.:|
  Rat   396 ------RFSFTA------------------------YGMGPC---LQAKDGV---------VPKG 418

  Fly   454 ASAIKATIPKIKD---------VNIIDKYSRMIFPISFLAFNLGYWLFY 493
            .:.....:||..|         ...||..||..||::||.||:.||:.|
  Rat   419 PNHAVQVMPKSADEMRKVFIDRAKKIDTISRACFPLAFLIFNIFYWVIY 467

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lcch3	NP_996469.1	LIC	15..493	CDD:273305	184/499 (37%)
		Neur_chan_LBD	47..256	CDD:280998	84/219 (38%)
		Neur_chan_memb	263..490	CDD:280999	89/237 (38%)
Glra3	NP_446176.3	LIC	28..467	CDD:273305	185/502 (37%)
		Neur_chan_LBD	63..269	CDD:280998	84/218 (39%)
		Neur_chan_memb	276..464	CDD:280999	89/237 (38%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3644
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810