Protein Alignment Lcch3 and gabrp

DIOPT Version :9

• Sequence 1: NP_996469.1
• Gene: Lcch3 / 32554
• FlyBaseID: FBgn0010240
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: XP_017948119.2
• Gene: gabrp / 100498164
• XenbaseID: XB-GENE-1012959
• Length: 401
• Species: Xenopus tropicalis
• Alignment Length: 470
• Identity: 173/470 - (36%)
• Similarity: 241/470 - (51%)
• Gaps: 100/470 - (21%)

  Fly    47 ILQGYDIRLRPNFGGEPLHVGMDLTIASFDAISEVNMDYTITMYLNQYWRDERLAFNIFGQYFDD 111
            |::.|:..|||.|..:|:.:.:.|.:||.||:||.|||||.|:.|.|.|.||||.|
 Frog    10 IMKDYNKYLRPKFNEKPIEIAVSLEVASIDAVSEENMDYTATINLRQRWTDERLVF--------- 65

  Fly   112 ENDDGISDVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLGGDGAVTYGMRFTTTLAC 176
            |.:..|    ||.....|.:|||||:..:.|.|||||||..|:||||..:|.|.|.:|.|||:||
 Frog    66 EGNRSI----TLDARLVESLWVPDTYIVDSKKSFLHDVTVENRLVRLFANGTVLYAIRITTTVAC 126

  Fly   177 MMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWKPT--PVRGVEDAELPQFTIIGYETNDRKERLA 239
            .|||..||:|.|.|.:::||:||:..|:...|...  .|||::..:|.|:|:..|.|.:...:..
 Frog   127 KMDLTKYPMDRQTCKLQLESWGYSEKDLTYVWMRANDSVRGMDHLQLAQYTVEQYYTTNSIGKDE 191

  Fly   240 TGVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTIST 304
            ||.|.||:|.|.|:||:.||:.:||:||.|:|:||||||||:..:..||...|:||||.||||..
 Frog   192 TGNYPRLALCFILRRNVVYFILETYIPSALLVVLSWVSFWISMSSVPARTCFGVTTVLAMTTIMM 256

  Fly   305 GVRSSLPRIS-YVKAIDIYLVMCFVFVFAALLEYAAVNYTYWGKRA--KKKIKKVKE-------- 358
            |.|.:.|..: .:||||:||.:||.|||.||||||..:|......|  |:|||...|
 Frog   257 GSRFNFPTANCIIKAIDVYLGICFSFVFGALLEYAFAHYCSELNSAVNKEKIKNSLEEPEHDISS 321

  Fly   359 ---CCPGKIGKSERSETCSTTEDIIELQDVRMSPIPSLRRGTYNATLDSIGTETMNLGKFPPSFR 420
               .|..|  :..|.|  :.||:..|...::.|.|                            |:
 Frog   322 VLIACDSK--QLNRKE--NQTENAPEKNSLKNSVI----------------------------FK 354

  Fly   421 ITRNYGTGHSQLRRRAQRGISTRPRMLHALKRGASAIKATIPKIKDVNI-----IDKYSRMIFPI 480
            :.                                  :|..|.::|..|:     :|:|||.:||:
 Frog   355 LW----------------------------------LKIKIIRLKKFNVTNPENVDRYSRTVFPL 385

  Fly   481 SFLAFNLGYWLFYIL 495
            .||..|:.||.:|:|
 Frog   386 IFLIINIIYWTYYLL 400

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lcch3	NP_996469.1	LIC	15..493	CDD:273305	171/466 (37%)
		Neur_chan_LBD	47..256	CDD:280998	91/210 (43%)
		Neur_chan_memb	263..490	CDD:280999	75/245 (31%)
gabrp	XP_017948119.2	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D226476at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR18945
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	3.110