Sequence 1: | NP_996469.1 | Gene: | Lcch3 / 32554 | FlyBaseID: | FBgn0010240 | Length: | 496 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_004911866.1 | Gene: | gabra5 / 100494208 | XenbaseID: | XB-GENE-980292 | Length: | 475 | Species: | Xenopus tropicalis |
Alignment Length: | 519 | Identity: | 170/519 - (32%) |
---|---|---|---|
Similarity: | 247/519 - (47%) | Gaps: | 95/519 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MTCFTRVGVS---CGLFFFL---LGAQLQLIRCIRKDVLAGRLENV---TQTISNILQGYDIRLR 56
Fly 57 PNFGGEPLHVGMDLTIASFDAISEVNMDYTITMYLNQYWRDERLAFNIFGQYFDDENDDGISDVL 121
Fly 122 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLGGDGAVTYGMRFTTTLACMMDLHYYPLD 186
Fly 187 SQNCTVEIESYGYTVSDVVMYWKPTPVRGVEDAE----LPQFTIIGYETNDRKERLATGVYQRLS 247
Fly 248 LSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPR 312
Fly 313 ISYVKAIDIYLVMCFVFVFAALLEYAAVNY---TYWGKRAKKKIKKVKECCPGKIGKSERSETCS 374
Fly 375 TTEDIIELQDVRMSPIPSLRRGTYNATLDSIGTETMN--LGKFPPSFRITRNYGTGHSQLRRRAQ 437
Fly 438 RGISTRPRMLHALKRGASAIKATIPKIKD-------VNIIDKYSRMIFPISFLAFNLGYWLFYI 494 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lcch3 | NP_996469.1 | LIC | 15..493 | CDD:273305 | 163/499 (33%) |
Neur_chan_LBD | 47..256 | CDD:280998 | 77/212 (36%) | ||
Neur_chan_memb | 263..490 | CDD:280999 | 72/238 (30%) | ||
gabra5 | XP_004911866.1 | LIC | 25..452 | CDD:273305 | 161/496 (32%) |
LGIC_ECD_GABAAR_A5 | 62..260 | CDD:349839 | 75/209 (36%) | ||
Cys-loop | 177..191 | CDD:349839 | 5/13 (38%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |