Protein Alignment Lcch3 and XB5799637

DIOPT Version :9

• Sequence 1: NP_996469.1
• Gene: Lcch3 / 32554
• FlyBaseID: FBgn0010240
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: XP_031762346.1
• Gene: XB5799637 / 100490720
• XenbaseID: XB-GENE-5799638
• Length: 409
• Species: Xenopus tropicalis
• Alignment Length: 462
• Identity: 178/462 - (38%)
• Similarity: 251/462 - (54%)
• Gaps: 70/462 - (15%)

  Fly    38 ENVTQTISNILQGYDIRLRPNFGGEPLHVGMDLTIASFDAISEVNMDYTITMYLNQYWRDERLAF 102
            |.:..||..:::||:..|||.|...|:.|||.|.|||.|.|||:|||||.|::|.|.|.||||.|
 Frog    11 EILPPTIQKLMKGYNKYLRPFFDNGPVTVGMSLDIASIDTISEINMDYTATIFLRQRWTDERLCF 75

  Fly   103 NIFGQYFDDENDDGISDVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLGGDGAVTYG 167
                    :.|..     |:|.|...|.:||||||..:.|.|||||:|..|:|:|:..:|.|.|.
 Frog    76 --------ESNKS-----LSLDGRLVELLWVPDTFIVDSKKSFLHDMTVENRLIRIYPNGTVLYA 127

  Fly   168 MRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWK--PTPVRGVEDAELPQFTIIGYE 230
            :|.|||:||.|||..||:|.|.||:.:||:.|..:||:.||.  ...|||::...|.|:.:..:.
 Frog   128 LRITTTVACSMDLTKYPMDKQTCTLXLESWSYNTNDVMFYWTRGNDSVRGLDALRLAQYAVEDHY 192

  Fly   231 TNDRKERLATGVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITT 295
            |:..:....||.|.:|...|.|:|||.||:.:||:||||:|:||||||||:..:..||:.:|:||
 Frog   193 TSVSEAVYETGRYPKLVFHFDLKRNILYFILETYVPSILLVVLSWVSFWISLSSVPARICIGVTT 257

  Fly   296 VLTMTTISTGVRSSLPRIS-YVKAIDIYLVMCFVFVFAALLEYAAVN-YTYWGKRAKKK-IKKVK 357
            ||||||:..|.|:|||..: ::||||:||.:||.|:|.||||||..: ||......|.. |||:
 Frog   258 VLTMTTLMMGARTSLPNANCFIKAIDVYLGICFSFIFGALLEYAIAHFYTLHQPHQKNSTIKKL- 321

  Fly   358 ECCPGKIGKSERSETCSTTEDIIELQDVRMSPIPSLRRGTYNATLDSIGTETMNLGKFPPSFRIT 422
                             ..||..::            .||.:|..|....:|.     ||.
 Frog   322 -----------------VAEDEADM------------NGTISAVSDGQSHQTE-----PPD---- 348

  Fly   423 RNYGTGHSQLRRRAQRGISTRPRMLHALKRGASAIKATIPKIKDVNIIDKYSRMIFPISFLAFNL 487
             ..|.|..:::....          ..|||........  ::::.:.||.|||:.||:||:..|:
 Frog   349 -EIGNGKKKIKSPVD----------PVLKRLLCVFYCF--QVQNPHDIDNYSRISFPLSFMIINV 400

  Fly   488 GYWLFYI 494
            .||.:|:
 Frog   401 FYWAYYL 407

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lcch3	NP_996469.1	LIC	15..493	CDD:273305	177/459 (39%)
		Neur_chan_LBD	47..256	CDD:280998	91/210 (43%)
		Neur_chan_memb	263..490	CDD:280999	77/229 (34%)
XB5799637	XP_031762346.1	LIC	2..406	CDD:273305	177/459 (39%)
		LGIC_ECD_GABAAR_pi	36..217	CDD:349805	84/193 (44%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D226476at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR18945
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	3.020