Sequence 1: | NP_996469.1 | Gene: | Lcch3 / 32554 | FlyBaseID: | FBgn0010240 | Length: | 496 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012811146.2 | Gene: | gabrb1 / 100489344 | XenbaseID: | XB-GENE-6049110 | Length: | 477 | Species: | Xenopus tropicalis |
Alignment Length: | 497 | Identity: | 238/497 - (47%) |
---|---|---|---|
Similarity: | 319/497 - (64%) | Gaps: | 42/497 - (8%) |
- Green bases have known domain annotations that are detailed below.
Fly 12 GLFFFL-LGAQLQLIRCIRKDVLAGRLENVTQTISNILQGYDIRLRPNFGGEPLHVGMDLTIASF 75
Fly 76 DAISEVNMDYTITMYLNQYWRDERLAFNIFGQYFDDENDDGISDVLTLSGDFAEKIWVPDTFFAN 140
Fly 141 DKNSFLHDVTERNKLVRLGGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVV 205
Fly 206 MYWK--PTPVRGVEDAELPQFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFVFQTYLPSI 268
Fly 269 LIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAA 333
Fly 334 LLEYAAVNYTYWGK--RAKKKIKKVKECCPGKIGKSERSETCSTTEDIIELQDVRMSPIPSLRRG 396
Fly 397 TYNATLDSIGTETMNLGKFPPSFRITR-NYGTGHSQLRRR-AQRGISTRP----RMLH---ALKR 452
Fly 453 GASAIKATIPKIKDVNIIDKYSRMIFPISFLAFNLGYWLFYI 494 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lcch3 | NP_996469.1 | LIC | 15..493 | CDD:273305 | 234/491 (48%) |
Neur_chan_LBD | 47..256 | CDD:280998 | 115/210 (55%) | ||
Neur_chan_memb | 263..490 | CDD:280999 | 105/237 (44%) | ||
gabrb1 | XP_012811146.2 | LIC | 9..475 | CDD:273305 | 235/493 (48%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 246 | 1.000 | Domainoid score | I2127 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 439 | 1.000 | Inparanoid score | I1627 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D226476at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001081 | |
OrthoInspector | 1 | 1.000 | - | - | otm48038 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X650 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
8 | 7.970 |