Protein Alignment Lcch3 and gabra6

DIOPT Version :9

• Sequence 1: NP_996469.1
• Gene: Lcch3 / 32554
• FlyBaseID: FBgn0010240
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: XP_031754593.1
• Gene: gabra6 / 100488862
• XenbaseID: XB-GENE-6049732
• Length: 455
• Species: Xenopus tropicalis
• Alignment Length: 480
• Identity: 169/480 - (35%)
• Similarity: 240/480 - (50%)
• Gaps: 62/480 - (12%)

  Fly    26 RCIRKDVLAGRL--ENVTQTISNILQGYDIRLRPNFGGEPLHVGMDLTIASFDAISEVNMDYTIT 88
            :.:..::.|..|  ||:|:.:..:|.|||.||||:|||....|..|:.:.||..:|:|:|:||:.
 Frog    16 KALGNNITAANLHSENITRILDRLLDGYDNRLRPSFGGPVTEVKTDIYVTSFGPVSDVDMEYTMD 80

  Fly    89 MYLNQYWRDERLAFNIFGQYFDDENDDGISDVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERN 153
            ::..|.|.||||.|            ||.:::|.|:.....|||.|||||.|.|.|..|::|..|
 Frog    81 IFFRQTWVDERLKF------------DGPTEILRLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPN 133

  Fly   154 KLVRLGGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWKPTPVRGV-- 216
            ||.|:..:|.|.|.||.|....|.|.|..:|:|...|.::..||.|..|::|..||..|:..|
 Frog   134 KLFRIMQNGTVLYTMRLTIKAECPMRLMNFPMDGHACPLKFGSYAYPKSEIVYTWKKGPLYSVEV 198

  Fly   217 --EDAELPQFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFW 279
              |.:.|.|:.::|.:.:.......||.|....:.|.|||.|||::..||:|..:.|:||.|.||
 Frog   199 PEESSSLLQYDLVGQKVSSETLLSNTGEYSLQVVMFFLQRKIGYYIIHTYIPCSMTVVLSQVVFW 263

  Fly   280 INHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYTY 344
            ||.|:..||...||||||||||:|...|.|.|::||..|:|.::.:||.|||:||:|:|||||..
 Frog   264 INKESVPARTVAGITTVLTMTTLSISARHSFPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFT 328

  Fly   345 WGKRAKKKIKKVKECCPGKIGKSERSETCSTTEDIIELQDVRMSPIPSLRRGTYNATLDSIGTET 409
            ..:..|..:|..|:.       :..:.|.....:.:.|.|                       ..
 Frog   329 NLQIQKTMMKAAKKA-------ALAAATARAENEFVTLSD-----------------------SN 363

  Fly   410 MNLGKFPPSFRITRNYGT-GHSQLRR----RAQRGISTRPRMLHALKRGASAIKATIPKIKDVNI 469
            .||.|...|.....|..| |...|..    ..|..|.||..||.         ..|..:....:.
 Frog   364 CNLKKRINSVASQGNQSTEGDLPLYEDSPYNEQTDIPTRDHMLS---------DTTSSQHTGTSK 419

  Fly   470 IDKYSRMIFPISFLAFNLGYWLFYI 494
            ||||:|::||:||..|||.||:.|:
 Frog   420 IDKYARILFPLSFAGFNLVYWVVYL 444

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lcch3	NP_996469.1	LIC	15..493	CDD:273305	168/477 (35%)
		Neur_chan_LBD	47..256	CDD:280998	80/212 (38%)
		Neur_chan_memb	263..490	CDD:280999	78/231 (34%)
gabra6	XP_031754593.1	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910