Protein Alignment Lcch3 and gabrr3

DIOPT Version :9

• Sequence 1: NP_996469.1
• Gene: Lcch3 / 32554
• FlyBaseID: FBgn0010240
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: XP_017947352.2
• Gene: gabrr3 / 100487991
• XenbaseID: XB-GENE-6039478
• Length: 481
• Species: Xenopus tropicalis
• Alignment Length: 458
• Identity: 178/458 - (38%)
• Similarity: 264/458 - (57%)
• Gaps: 70/458 - (15%)

  Fly    48 LQGYDIRLRPNFGGEPLHVGMDLTIASFDAISEVNMDYTITMYLNQYWRDERLAFNIFGQYFDDE 112
            :..:|..:||.|||..:.||:|:.|.|.|:||||:||:|:|:||..||:||||:|         :
 Frog    83 IDDHDFAMRPGFGGSAIPVGIDVQIESIDSISEVDMDFTMTLYLRHYWKDERLSF---------Q 138

  Fly   113 NDDGISDVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLGGDGAVTYGMRFTTTLACM 177
            :.:..|  :|..|...:||||||.||.:.|.||:||.|..|.::|:..||.|.:.:|.|.|..|.
 Frog   139 STNNRS--MTFDGRLIKKIWVPDVFFVHSKRSFIHDTTMENIMLRVYPDGNVLFSLRITVTAMCF 201

  Fly   178 MDLHYYPLDSQNCTVEIESYGYTVSDVVMYWKPTPVRGVEDAE------LPQFTIIGYE-TNDRK 235
            ||...:|||:|||::|:|||.|...|:::|||    ||.|..:      |.||.|..:. :|...
 Frog   202 MDFSRFPLDTQNCSLELESYAYNEEDLMLYWK----RGNESLKTDEHIALSQFFIEEFSASNGLA 262

  Fly   236 ERLATGVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 300
            ...:||.|.||.::|.|:|:|.:|:.|:|.|::|:||||||||||:..|..|||:|||||||||:
 Frog   263 FYSSTGWYNRLFINFILRRHIFFFLLQSYFPAMLMVMLSWVSFWIDRRAVPARVSLGITTVLTMS 327

  Fly   301 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYTYWGKRAKKKIKKVKECCPGKIG 365
            ||.|||.:|:|::||:||:|:||.:.|:|||.:::|||||||
 Frog   328 TIITGVSASMPQVSYIKAVDVYLWISFLFVFLSVIEYAAVNY----------------------- 369

  Fly   366 KSERSETCSTTEDIIELQDVRMSPIPSLRRGTYNATLDSIGTETMNL-GKFPPSFRITRNYGTGH 429
                   .:|.|:..:|:          |||..:|||:....:.|.. |.|..| ....|:.. |
 Frog   370 -------LTTAEERKQLK----------RRGKSSATLNLEAVQAMAFDGCFHDS-DADLNFSM-H 415

  Fly   430 SQLRRRAQRGISTRPRMLHALK-RGASAIKATIPKI--KDVNIIDKYSRMIFPISFLAFNLGYWL 491
            |:  ..:.||.:.....|.|:: |...:|:....:|  ::.::||.|||:|||..::.||..||.
 Frog   416 SE--ESSSRGRAASVATLDAMRVRRKKSIRGNFGRIILENNHVIDTYSRIIFPTVYIVFNFFYWG 478

  Fly   492 FYI 494
            .|:
 Frog   479 AYL 481

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lcch3	NP_996469.1	LIC	15..493	CDD:273305	177/455 (39%)
		Neur_chan_LBD	47..256	CDD:280998	88/214 (41%)
		Neur_chan_memb	263..490	CDD:280999	84/230 (37%)
gabrr3	XP_017947352.2	LIC	77..480	CDD:273305	177/455 (39%)
		LGIC_ECD	98..283	CDD:355788	82/199 (41%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D226476at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR18945
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	3.020