Sequence 1: | NP_996469.1 | Gene: | Lcch3 / 32554 | FlyBaseID: | FBgn0010240 | Length: | 496 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002664179.2 | Gene: | gabrb1 / 100331377 | ZFINID: | ZDB-GENE-090313-230 | Length: | 484 | Species: | Danio rerio |
Alignment Length: | 471 | Identity: | 240/471 - (50%) |
---|---|---|---|
Similarity: | 305/471 - (64%) | Gaps: | 48/471 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 40 VTQTISNILQGYDIRLRPNFGGEPLHVGMDLTIASFDAISEVNMDYTITMYLNQYWRDERLAFNI 104
Fly 105 FGQYFDDENDDGISDVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLGGDGAVTYGMR 169
Fly 170 FTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWK-PTPVRGVEDAELPQFTIIGYETND 233
Fly 234 RKERLATGVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 298
Fly 299 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYTYWGKRAKKKIKKVKECCPGK 363
Fly 364 IGKSERSETCSTTEDI---IELQ--DVRMSPIPSL-RRGTYNATLDSIGTETMNLGKFP------ 416
Fly 417 ---PSFRITRNYGTGHSQLRRRAQRGISTRPRMLHALKRGASAIKATIPKIKDVNIIDKYSRMIF 478
Fly 479 PISFLAFNLGYWLFYI 494 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lcch3 | NP_996469.1 | LIC | 15..493 | CDD:273305 | 239/468 (51%) |
Neur_chan_LBD | 47..256 | CDD:280998 | 120/209 (57%) | ||
Neur_chan_memb | 263..490 | CDD:280999 | 108/241 (45%) | ||
gabrb1 | XP_002664179.2 | LIC | 19..482 | CDD:273305 | 239/468 (51%) |
Neur_chan_LBD | 49..250 | CDD:280998 | 120/212 (57%) | ||
Neur_chan_memb | 257..479 | CDD:280999 | 108/241 (45%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 251 | 1.000 | Domainoid score | I2057 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3644 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 433 | 1.000 | Inparanoid score | I1673 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D226476at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001081 | |
OrthoInspector | 1 | 1.000 | - | - | otm25145 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101786 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R2537 |
SonicParanoid | 1 | 1.000 | - | - | X650 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
14 | 13.860 |