Sequence 1: | NP_996469.1 | Gene: | Lcch3 / 32554 | FlyBaseID: | FBgn0010240 | Length: | 496 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001096164.1 | Gene: | gabrb3 / 100124708 | XenbaseID: | XB-GENE-6030743 | Length: | 475 | Species: | Xenopus tropicalis |
Alignment Length: | 463 | Identity: | 236/463 - (50%) |
---|---|---|---|
Similarity: | 307/463 - (66%) | Gaps: | 23/463 - (4%) |
- Green bases have known domain annotations that are detailed below.
Fly 35 GRLENVTQTISNILQGYDIRLRPNFGGEPLHVGMDLTIASFDAISEVNMDYTITMYLNQYWRDER 99
Fly 100 LAFNIFGQYFDDENDDGISDVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLGGDGAV 164
Fly 165 TYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYW--KPTPVRGVEDAELPQFTII 227
Fly 228 GYETNDRKERLATGVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALG 292
Fly 293 ITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYTYWGKRAKKKIKKVK 357
Fly 358 ECCPGKIGKSERSETCSTTEDIIELQDVRMSPIPSLRRGTYNATLDSIGTETMNLGKFPPSFRIT 422
Fly 423 RNYGTGHSQL-RRRAQRGISTRPRMLHALKRGASAIKATIPKIKDVNIIDKYSRMIFPISFLAFN 486
Fly 487 LGYWLFYI 494 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lcch3 | NP_996469.1 | LIC | 15..493 | CDD:273305 | 234/460 (51%) |
Neur_chan_LBD | 47..256 | CDD:280998 | 119/210 (57%) | ||
Neur_chan_memb | 263..490 | CDD:280999 | 103/227 (45%) | ||
gabrb3 | NP_001096164.1 | LIC | 11..473 | CDD:273305 | 234/460 (51%) |
Neur_chan_LBD | 41..243 | CDD:280998 | 119/213 (56%) | ||
Neur_chan_memb | 250..470 | CDD:280999 | 103/227 (45%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 246 | 1.000 | Domainoid score | I2127 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H633 | |
Inparanoid | 1 | 1.050 | 439 | 1.000 | Inparanoid score | I1627 |
OMA | 1 | 1.010 | - | - | QHG47165 | |
OrthoDB | 1 | 1.010 | - | - | D226476at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001081 | |
OrthoInspector | 1 | 1.000 | - | - | otm48038 | |
Panther | 1 | 1.100 | - | - | O | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R2537 |
SonicParanoid | 1 | 1.000 | - | - | X650 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
12 | 12.110 |