Protein Alignment Lcch3 and LOC100001259

DIOPT Version :9

• Sequence 1: NP_996469.1
• Gene: Lcch3 / 32554
• FlyBaseID: FBgn0010240
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: XP_021336767.1
• Gene: LOC100001259 / 100001259
• -ID: -
• Length: 369
• Species: Danio rerio
• Alignment Length: 325
• Identity: 130/325 - (40%)
• Similarity: 187/325 - (57%)
• Gaps: 20/325 - (6%)

  Fly    26 RCIRKDVLAGRLEN----VTQTISNILQGYDIRLRPNFGGEPLHVGMDLTIASFDAISEVNMDYT 86
            |.:..|......:|    .|:.:..:|.|||.||||..|.....|..|:.:.||..:|:.:|:||
Zfish    21 RSVSADATTDAFKNNITLFTRILDRLLDGYDNRLRPGLGDRVTTVKTDIYVTSFGPVSDTDMEYT 85

  Fly    87 ITMYLNQYWRDERLAFNIFGQYFDDENDDGISDVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTE 151
            |.::..|.|:||||.|            :|..::|.|:...|.|||.|||||.|.|.|..|::|.
Zfish    86 IDVFFRQSWKDERLKF------------EGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTM 138

  Fly   152 RNKLVRLGGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWKPTPVRGV 216
            .|||:|:..||.:.|.||.|....|.|.|..:|:|..:|.::..||.||.::|...|.......|
Zfish   139 PNKLLRIQDDGTLLYTMRLTVHAECPMHLEDFPMDFHSCPLKFGSYAYTTTEVTYTWTKNASNSV 203

  Fly   217 ----EDAELPQFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVS 277
                |.:.|.|:.::|....:...|.:||.|..::..|.|:|.|||||.|||||.|:.|:||.||
Zfish   204 VVEEESSRLNQYDLLGQTVGNETIRSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVS 268

  Fly   278 FWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 342
            ||:|.|:..||...|:||||||||:|...|:|||:::|..|:|.::.:|:.|||:||:|:|.|||
Zfish   269 FWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNY 333

  Fly   343  342
            Zfish   334  333

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lcch3	NP_996469.1	LIC	15..493	CDD:273305	130/325 (40%)
		Neur_chan_LBD	47..256	CDD:280998	76/212 (36%)
		Neur_chan_memb	263..490	CDD:280999	44/80 (55%)
LOC100001259	XP_021336767.1	Neur_chan_LBD	7..>350	CDD:332142	130/325 (40%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910