DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8916 and GLRA3

DIOPT Version :9

Sequence 1:NP_573090.3 Gene:CG8916 / 32553 FlyBaseID:FBgn0030707 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_006520.2 Gene:GLRA3 / 8001 HGNCID:4328 Length:464 Species:Homo sapiens


Alignment Length:520 Identity:167/520 - (32%)
Similarity:255/520 - (49%) Gaps:98/520 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 VRRKAAADMLSRNISM----ILENLLKR---YEQSQLPTHGQGVPTVVQTNILIRSMGPVSELDM 152
            |..|......||:..|    .|:.|:.|   |: :::..:.:|.|..|..||.|.|.|.::|..|
Human    26 VATKETDSARSRSAPMSPSDFLDKLMGRTSGYD-ARIRPNFKGPPVNVTCNIFINSFGSIAETTM 89

  Fly   153 DYSMDCYFRQYWRDKRLSF-KGPIKSLSLSIKMLDKIWRPDTYFYNGKHSQIHMITVPNKLLRLD 216
            ||.::.:.||.|.|.||:: :.|..||.|...|||.||:||.:|.|.|.:..|.:|..|||||:.
Human    90 DYRVNIFLRQKWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIF 154

  Fly   217 QNGGILYSMRLTIKATCPMELQNFPMDRQSCPLVIGSYGYINQQLIYEWKNQDDA-VSFVPGMTL 280
            :||.:|||:|||:..:|||:|:|||||.|:|.:.:.|:||....||:||  ||:| |....|:||
Human   155 KNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEW--QDEAPVQVAEGLTL 217

  Fly   281 NQFDLISMMHRNFTTVR-REGDFSVLHVAFNLKRHTGYFLIQVYVPCILIVVLSWVSFWIHREAT 344
            .||.|.......:.|.. ..|.|:.:.|.|:|:|..||:|||:|:|.:|||:||||||||:.:|.
Human   218 PQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 282

  Fly   345 SDRVSLCVTSVLTLSTISLDSRTDLPKVKYATALDWFLLMSFLYCIATLLEFAGVHYFTKLGSGE 409
            ..||:|.:|:|||::|.|..||..||||.|..|:|.::.:..|:..:.|||:|.|::.::     
Human   283 PARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR----- 342

  Fly   410 SPQLEDQWEDICIANSLSDHAGEVDGDGEADADPFADEDSSNGSENDDNEAGASESVESKSGVCV 474
                  |.:::........:..|.          ||.|.....|:.||      |..||:...  
Human   343 ------QHKELLRFRRKRKNKTEA----------FALEKFYRFSDMDD------EVRESRFSF-- 383

  Fly   475 CNKNDALGLEYEVSLQNSLAGAGFLKRNAIFCPTYNDPSYILPNTMERTTQTEPPAVSRLHQMWM 539
                .|.|:...:..::.:...|         |  |.|..::|                      
Human   384 ----TAYGMGPCLQAKDGMTPKG---------P--NHPVQVMP---------------------- 411

  Fly   540 CLKSDNSFRKQRERNAAAQKSEQGGANCYVNSVSLIDRVARIAFPMSFAFLNLLYWWAYGMYKKE 604
              ||.:..||                 .:::....||.::|..||::|...|:.||..|.:.:.|
Human   412 --KSPDEMRK-----------------VFIDRAKKIDTISRACFPLAFLIFNIFYWVIYKILRHE 457

  Fly   605  604
            Human   458  457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8916NP_573090.3 LIC 92..598 CDD:273305 165/512 (32%)
Neur_chan_LBD 111..315 CDD:280998 86/209 (41%)
Neur_chan_memb 322..>403 CDD:280999 38/80 (48%)
GLRA3NP_006520.2 LIC 12..451 CDD:273305 165/512 (32%)
Strychnine-binding. /evidence=ECO:0000269|PubMed:26416729 235..240 1/4 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3644
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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