DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8916 and glra2

DIOPT Version :9

Sequence 1:NP_573090.3 Gene:CG8916 / 32553 FlyBaseID:FBgn0030707 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_001161371.1 Gene:glra2 / 793646 ZFINID:ZDB-GENE-090407-1 Length:448 Species:Danio rerio


Alignment Length:531 Identity:167/531 - (31%)
Similarity:257/531 - (48%) Gaps:130/531 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 RVRRKAAADMLSRNISM----ILENLLKR---YEQSQLPTHGQGVPTVVQTNILIRSMGPVSELD 151
            ||......|:||.:.||    .|:.|:.|   |: :::..:.:|.|..|..||.|.|.|.|:|..
Zfish    23 RVSSGKDPDLLSSSSSMSPSDFLDKLMGRTSGYD-ARIRPNFKGPPVNVTCNIFINSFGSVTETT 86

  Fly   152 MDYSMDCYFRQYWRDKRLSF-KGPIKSLSLSIKMLDKIWRPDTYFYNGKHSQIHMITVPNKLLRL 215
            |||.::.:.||.|.|.||:: :.|..||.|...|||.||:||.:|.|.|.:..|.:|..|||||:
Zfish    87 MDYRVNIFLRQKWNDPRLAYSEYPDSSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRI 151

  Fly   216 DQNGGILYSMRLTIKATCPMELQNFPMDRQSCPLVIGSYGYINQQLIYEWKNQDDAVSFVPGMTL 280
            .::|.:|||:|||:..:|||:|:|||||.|:|.:.:.|:||....||:||.:: ..|....|:||
Zfish   152 FKDGTVLYSIRLTLILSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLDK-GPVQVADGLTL 215

  Fly   281 NQFDL-----ISMMHRNFTTVRREGDFSVLHVAFNLKRHTGYFLIQVYVPCILIVVLSWVSFWIH 340
            .||.:     :....:::.|    |.|:.:.|.|:|:|..||:|||:|:|.:|||:||||||||:
Zfish   216 PQFLIRDEKDLGYCTKHYNT----GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWIN 276

  Fly   341 REATSDRVSLCVTSVLTLSTISLDSRTDLPKVKYATALDWFLLMSFLYCIATLLEFAGVHY---- 401
            .:|...||:|.:|:|||::|.|..||..||||.|..|:|.::.:..|:..|.|||:|||::    
Zfish   277 MDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAGVNFVSRQ 341

  Fly   402 ---FTKLGSGESPQLEDQWEDICIANSLSDHAGEVDGDGEADADPFADEDSSNGSENDDNEAGAS 463
               |.:|   :..|...|.|                            ||..:|..:        
Zfish   342 QKEFLRL---KRRQRRTQKE----------------------------EDLQDGRLH-------- 367

  Fly   464 ESVESKSGVCVCNKNDALGLEYEVSLQNSLAGAGFLKRNAIFCPTYNDPSYILPNTMERTTQTEP 528
               .|......|.|:.|                                  ::.||  :..|.:.
Zfish   368 ---FSSYNTTTCVKDGA----------------------------------VVKNT--QVNQIQQ 393

  Fly   529 PAVSRLHQMWMCLKSDNSFRKQRERNAAAQKSEQGGANCYVNSVSLIDRVARIAFPMSFAFLNLL 593
            |::         ||:..:.||:                 :|:....||.::|.|||::|...|:.
Zfish   394 PSI---------LKNTETNRKK-----------------FVDRAKRIDTISRAAFPLAFLIFNVF 432

  Fly   594 YWWAYGMYKKE 604
            ||..|.:.:.|
Zfish   433 YWITYKIIRHE 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8916NP_573090.3 LIC 92..598 CDD:273305 165/523 (32%)
Neur_chan_LBD 111..315 CDD:280998 82/212 (39%)
Neur_chan_memb 322..>403 CDD:280999 40/87 (46%)
glra2NP_001161371.1 LIC 44..437 CDD:273305 158/502 (31%)
Neur_chan_LBD 45..251 CDD:280998 82/211 (39%)
Neur_chan_memb 258..434 CDD:280999 69/279 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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