Sequence 1: | NP_573090.3 | Gene: | CG8916 / 32553 | FlyBaseID: | FBgn0030707 | Length: | 612 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_065234.1 | Gene: | Gabrq / 57249 | MGIID: | 1888498 | Length: | 638 | Species: | Mus musculus |
Alignment Length: | 647 | Identity: | 163/647 - (25%) |
---|---|---|---|
Similarity: | 287/647 - (44%) | Gaps: | 142/647 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 63 PSSKPKTNGSLKRSQNATNLS-YSSSEISNQRRVRRKAAADMLSRNISMILENLLKRYEQSQLPT 126
Fly 127 HGQGVPTVVQTNILIRSMGPVSELDMDYSMDCYFRQYWRDKRLSFKGPIKSLSLSIKMLDKIWRP 191
Fly 192 DTYFYNGKHSQIHMITVPNKLLRLDQNGGILYSMRLTIKATCPMELQNFPMDRQSCPLVIGSYGY 256
Fly 257 INQQLIYEWKNQDDAVSFVPGMTLNQFDLISMMHRNFTTVRRE-----GDFSVLHVAFNLKRHTG 316
Fly 317 YFLIQVYVPCILIVVLSWVSFWIHREATSDRVSLCVTSVLTLSTISLDSRTDLPKVKYATALDWF 381
Fly 382 LLMSFLYCIATLLEFAGVHYFTKLGSGESPQLED-------------QWEDICIANSLSDHAGEV 433
Fly 434 DGDGEADADPFAD--------EDSSNGS---ENDDNEAGASESVE-------------------- 467
Fly 468 ---SKSGVCVCN-------KNDAL-------------------GLEYEVSLQNSLAGAGFLK--- 500
Fly 501 -RNAIFCPTYN-DPSYILPNTMERTT-------QTEPPAVSRLHQMWMCLKSDNSFRKQRERNAA 556
Fly 557 AQKSEQGGANC-----------------YVNSVSLIDRVARIAFPMSFAFLNLLYWWAYGMY 601 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG8916 | NP_573090.3 | LIC | 92..598 | CDD:273305 | 153/612 (25%) |
Neur_chan_LBD | 111..315 | CDD:280998 | 70/208 (34%) | ||
Neur_chan_memb | 322..>403 | CDD:280999 | 28/80 (35%) | ||
Gabrq | NP_065234.1 | LGIC_ECD_GABAAR_theta | 82..263 | CDD:349804 | 62/186 (33%) |
Cys-loop | 183..197 | CDD:349804 | 8/13 (62%) | ||
LGIC_TM_GABAAR_theta | 266..365 | CDD:349858 | 32/101 (32%) | ||
TM1 helix | 266..289 | CDD:349858 | 12/22 (55%) | ||
TM2 helix | 293..317 | CDD:349858 | 9/23 (39%) | ||
TM3 helix | 325..351 | CDD:349858 | 7/28 (25%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 491..515 | 3/23 (13%) | |||
LGIC_TM | <604..636 | CDD:365787 | 12/32 (38%) | ||
TM4 helix | 612..633 | CDD:349850 | 9/21 (43%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3644 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |