Protein Alignment CG8916 and gabrr3a

DIOPT Version :10

• Sequence 1: NP_573090.3
• Gene: CG8916 / 32553
• FlyBaseID: FBgn0030707
• Length: 612
• Species: Drosophila melanogaster
• Sequence 2: NP_001122232.1
• Gene: gabrr3a / 570876
• ZFINID: ZDB-GENE-080722-20
• Length: 472
• Species: Danio rerio
• Alignment Length: 543
• Identity: 155/543 - (28%)
• Similarity: 244/543 - (44%)
• Gaps: 127/543 - (23%)

  Fly    87 SEISNQRR---------VRRK--AAADMLSRNISMILENLLKRYEQSQLPTH---------GQGV 131
            |...||||         .:.|  ...|..::........|:|..:..::..|         |..:
Zfish    25 SNTQNQRRHKDVYLGENTKHKFGGRIDFKTKKSDSTKSLLIKSEQLLRIEDHDFAMRPGFGGSAI 89

  Fly   132 PTVVQTNILIRSMGPVSELDMDYSMDCYFRQYWRDKRLSF-KGPIKSLSLSIKMLDKIWRPDTYF 195
            |  |..::.:.|:..:||::||::|..|.|.||:|.||:| ....||.:...:::.|||.||.:|
Zfish    90 P--VGIDVQVESIDGISEVNMDFTMTLYLRHYWQDDRLAFPSSNNKSRTFDARLVKKIWVPDVFF 152

  Fly   196 YNGKHSQIHMITVPNKLLRLDQNGGILYSMRLTIKATCPMELQNFPMDRQSCPLVIGSYGYINQQ 260
            .:.|.|.||..|:.|.:||:..:|.||||:|:|:.|.|.|:...||:|.|:|.|.:.||.|....
Zfish   153 VHSKRSFIHDTTMENIMLRVFPDGNILYSVRITVTALCSMDFSRFPLDTQNCSLELESYAYNEND 217

  Fly   261 LIYEWKNQDDAVSFVPGMTLNQFDLISMMHRNF--TTVRREGDFSVLHVAFNLKRHTGYFLIQVY 323
            |:..|||.:|::. ...:.|:|| .|...|.::  ......|.::.|::.|.|:||..:|::|.|
Zfish   218 LMLYWKNGNDSLR-TDEIALSQF-FIEEFHPSYGLAFYSSTGWYNRLYINFILRRHIFFFMLQTY 280

  Fly   324 VPCILIVVLSWVSFWIHREATSDRVSLCVTSVLTLSTISLDSRTDLPKVKYATALDWFLLMSFLY 388
            .|.:|:|:||||||||.|.|...||||.:|:|||:|||.......:|:|.|..|:|.:|..|||:
Zfish   281 FPTMLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVSASMPQVSYVKAVDIYLWASFLF 345

  Fly   389 CIATLLEFAGVHYFT------KLGSGESPQLEDQWEDICIANSLSDHAGEVDGDGEADADPFADE 447
            ...:::|:|.|:|||      ||..|:.|...|..:.:.......|         :.||.||.:
Zfish   346 VFLSVIEYAAVNYFTTVEEMKKLQKGKLPASYDATQAMAYDGCFHD---------DIDASPFPE- 400

  Fly   448 DSSNGSENDDNEAGASESVESKSGVCVCNKNDALGLEYEVSLQNSLAGAGFLKRNAIFCPTYNDP 512
                                                                      .||....
Zfish   401 ----------------------------------------------------------LPTTPST 407

  Fly   513 SYILPNTMERTTQTEPPAVSRLHQMWMCLKSDNSFRKQRERNAAAQKSEQGGANC-YVNSVS-LI 575
            :..:|   .|.:.||||..... ::|            |:|:.        |.|. ::.|.| :|
Zfish   408 TRTIP---ARASSTEPPPTEGT-RLW------------RKRSV--------GKNIRFIMSNSYMI 448

  Fly   576 DRVARIAFPMSFAFLNLLYWWAY 598
            |..:||.||:::...|::||..|
Zfish   449 DSYSRILFPLAYLLFNIIYWCIY 471

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG8916	NP_573090.3	LIC	92..598	CDD:455710	152/536 (28%)
		LGIC_ECD_GABAR_GRD-like	132..314	CDD:349808	65/184 (35%)
		Cys-loop	233..247	CDD:349808	6/13 (46%)
gabrr3a	NP_001122232.1	LIC	67..471	CDD:455710	145/499 (29%)
		LGIC_ECD	88..272	CDD:475126	66/187 (35%)