DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8916 and gabrg2

DIOPT Version :9

Sequence 1:NP_573090.3 Gene:CG8916 / 32553 FlyBaseID:FBgn0030707 Length:612 Species:Drosophila melanogaster
Sequence 2:XP_021324510.1 Gene:gabrg2 / 553402 ZFINID:ZDB-GENE-091118-65 Length:477 Species:Danio rerio


Alignment Length:523 Identity:169/523 - (32%)
Similarity:260/523 - (49%) Gaps:89/523 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 NATNLSYSSSEISNQRRVRRKAAADMLSRNISMILENLLKRYEQSQLPTHGQGVPTVVQTNILIR 142
            ::..|.....|::|:..|   ....:...:::.||.:||..|:....|..|. .|||:.|::.:.
Zfish    39 SSVQLESDDDEVTNKTWV---LTPKVYESDVTHILNSLLDGYDNKLRPDIGV-KPTVIHTDMFVN 99

  Fly   143 SMGPVSELDMDYSMDCYFRQYWRDKRLSFKGPIKSLSLSIKMLDKIWRPDTYFYNGKHSQIHMIT 207
            |:|||:.::|:|::|.:|.|.|.|:||.|...:|.|.|:..|:.|||.|||:|.|.|.:..|.||
Zfish   100 SIGPVNAINMEYTIDIFFAQTWYDRRLKFNSTMKVLRLNSNMVGKIWIPDTFFRNSKKADAHWIT 164

  Fly   208 VPNKLLRLDQNGGILYSMRLTIKATCPMELQNFPMDRQSCPLVIGSYGYINQQLIYEWKNQDDAV 272
            .||::||:..:|.|||::||||.|.|.::|.|||||..||||...||||..::::|:||.....|
Zfish   165 TPNRMLRIWNDGRILYTLRLTIDAECQLKLNNFPMDEHSCPLEFSSYGYPKEEIVYKWKRSSVEV 229

  Fly   273 SFVPGMTLNQFDLISMMHRNFTTVRR--EGDFSVLHVAFNLKRHTGYFLIQVYVPCILIVVLSWV 335
            ..:....|.||..:.:  ||.:.|.|  .||:.||.|.|:|.|..|||.||.|:||.||||||||
Zfish   230 GDIRSWRLYQFSFVGL--RNTSEVVRTVSGDYVVLTVFFDLSRRMGYFTIQTYIPCTLIVVLSWV 292

  Fly   336 SFWIHREATSDRVSLCVTSVLTLSTISLDSRTDLPKVKYATALDWFLLMSFLYCIATLLEFAGVH 400
            ||||:::|...|.||.:|:|||::|:|..:|..||||.|.||:|.|:.:.|::..|.|:|:..:|
Zfish   293 SFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALIEYGTLH 357

  Fly   401 YFTKLGSGESPQLEDQWEDICIANSLSDHAGEVDGDGEADADPFADEDSSNGSENDDNEAGASES 465
            ||.   |...|            :..||         :...:|.....||..:...|....::.:
Zfish   358 YFV---SNRKP------------SKKSD---------KKKKNPLLRLFSSKQAPTVDIRPRSATA 398

  Fly   466 VESKSGVCVCNKNDALGLEYEVSLQNSLAGAGFLKRNAIFCPTYNDPSYILPNTMERTTQTEPPA 530
            ::..:...:..:::..|.|       .|.|...   .:.||                        
Zfish   399 IQMNNATQMQERDEEYGYE-------CLDGKDC---TSFFC------------------------ 429

  Fly   531 VSRLHQMWMCLKSDNSFRKQRERNAAAQKSEQGGANCYVNSVSLIDRVARIAFPMSFAFLNLLYW 595
                     |.:...|...:..|             .::. |:.||..|||.||.:|...|::||
Zfish   430 ---------CFEDCRSGAWRHGR-------------LHIR-VAKIDSYARIFFPTAFGLFNVVYW 471

  Fly   596 WAY 598
            ::|
Zfish   472 FSY 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8916NP_573090.3 LIC 92..598 CDD:273305 165/507 (33%)
Neur_chan_LBD 111..315 CDD:280998 88/205 (43%)
Neur_chan_memb 322..>403 CDD:280999 41/80 (51%)
gabrg2XP_021324510.1 Neur_chan_LBD 69..474 CDD:332142 164/488 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 199 1.000 Domainoid score I3005
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 368 1.000 Inparanoid score I2100
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1057372at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm24219
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18945
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3154
SonicParanoid 1 1.000 - - X127
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
99.100

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