Sequence 1: | NP_573090.3 | Gene: | CG8916 / 32553 | FlyBaseID: | FBgn0030707 | Length: | 612 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_524483.1 | Gene: | nAChRbeta2 / 42920 | FlyBaseID: | FBgn0004118 | Length: | 519 | Species: | Drosophila melanogaster |
Alignment Length: | 478 | Identity: | 91/478 - (19%) |
---|---|---|---|
Similarity: | 175/478 - (36%) | Gaps: | 128/478 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 82 LSYSSSEISNQRRVRRKAAADMLSRNISMILENLLKRYEQSQLPTHGQGVPTVVQTNILIRSMGP 146
Fly 147 VSELDMDYSMDCYFRQYWRDKRLSFK----GPIKSLSLSIKMLDKIWRPDTYFYNGKHSQIHMIT 207
Fly 208 VPNKLLRLDQNGGILYSMRLTIKATCPMELQNFPMDRQSCPLVIGSYGYINQQLIYEWKNQDDAV 272
Fly 273 SFVPGMTLNQ-------------FDLISMMHRNFTTVRRE------GDFSVLHVAFNLKRHTGYF 318
Fly 319 LIQVYVPCILIVVLSWVSFWIHREATSDRVSLCVTSVLTLSTISLDSRTDLPKVKYATALDWFLL 383
Fly 384 MSFLYCIATLLEFAGVHYFTKLGSGESPQLEDQWEDICIAN----SLSDHAGEVDGDGEADADPF 444
Fly 445 A----------------------DEDSSNGSENDDNEAGASESV--------ESKSGVCVCNKND 479
Fly 480 ALGLEYEVSLQNSLAGAGFLKRN 502 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG8916 | NP_573090.3 | LIC | 92..598 | CDD:273305 | 87/468 (19%) |
Neur_chan_LBD | 111..315 | CDD:280998 | 44/226 (19%) | ||
Neur_chan_memb | 322..>403 | CDD:280999 | 16/80 (20%) | ||
nAChRbeta2 | NP_524483.1 | LIC | 9..479 | CDD:273305 | 91/478 (19%) |
LGIC_ECD_nAChR_proto_alpha-like | 29..247 | CDD:349832 | 49/243 (20%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18945 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |