Protein Alignment CG8916 and nAChRalpha2

DIOPT Version :9

• Sequence 1: NP_573090.3
• Gene: CG8916 / 32553
• FlyBaseID: FBgn0030707
• Length: 612
• Species: Drosophila melanogaster
• Sequence 2: NP_524482.1
• Gene: nAChRalpha2 / 42919
• FlyBaseID: FBgn0000039
• Length: 576
• Species: Drosophila melanogaster
• Alignment Length: 316
• Identity: 63/316 - (19%)
• Similarity: 146/316 - (46%)
• Gaps: 38/316 - (12%)

  Fly   111 ILENLLKRYEQSQLPTHGQGVPTVVQTNILIRSMGPVSELDMDYSMDCYFRQYWRDKRLSFK--- 172
            :.::||..|.:...|........:|:..:.:..:..::..|...:.:.:....|:|.:..:.
  Fly    48 LYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKDQILTTNVWLEHEWQDHKFKWDPSE 112

  Fly   173 -GPIKSLSLSIKMLDKIWRPDTYFYNGKHSQIHMITVPNKLLRLDQNGGILYSMRLTIKATCPME 236
             |.:..|.:.   .:.||.||...||....: :::|...|.: |...|.::::.....|::|.::
  Fly   113 YGGVTELYVP---SEHIWLPDIVLYNNADGE-YVVTTMTKAI-LHYTGKVVWTPPAIFKSSCEID 172

  Fly   237 LQNFPMDRQSCPLVIGSYGYINQQL----IYEWKNQDDAVSFVPGMTLNQF------DLISM--- 288
            ::.||.|:|:|.:..||:.|...|:    |.:..::|:.|..  |:.|.::      |::.:
  Fly   173 VRYFPFDQQTCFMKFGSWTYDGDQIDLKHISQKNDKDNKVEI--GIDLREYYPSVEWDILGVPAE 235

  Fly   289 MHRNFTTVRREGDFSVLHVAFNLKRHTGYFLIQVYVPCILIVVLSWVSFWIHREATSDRVSLCVT 353
            .|..:.....| .:..:.....|:|.|.::.:.:.:||:.|..||.:.|::..: :.::::||::
  Fly   236 RHEKYYPCCAE-PYPDIFFNITLRRKTLFYTVNLIIPCVGISYLSVLVFYLPAD-SGEKIALCIS 298

  Fly   354 SVLT-------LSTISLDSRTDLPKV-KYATALDWFLLMSFLYCIATLLEFAGVHY 401
            .:|:       :|.|...:...||.: ||   |.:.:|:..|..:.|:: ...:||
  Fly   299 ILLSQTMFFLLISEIIPSTSLALPLLGKY---LLFTMLLVGLSVVITII-ILNIHY 350

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG8916	NP_573090.3	LIC	92..598	CDD:273305	63/316 (20%)
		Neur_chan_LBD	111..315	CDD:280998	41/220 (19%)
		Neur_chan_memb	322..>403	CDD:280999	21/88 (24%)
nAChRalpha2	NP_524482.1	LGIC_ECD_nAChR_proto_alpha-like	44..263	CDD:349832	42/222 (19%)
		LIC	47..544	CDD:273305	63/316 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR18945
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	1.100